Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq13 149 2e-33
seq19 109 2e-21
seq5 98.7 3e-18
>seq13
Length=1013014
Score = 149 bits (164), Expect = 2e-33
Identities = 107/123 (87%), Gaps = 9/123 (7%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCC----CTGTATCAGTATTTATTGTCACT 56
|||||||||||||||||||||| |||||||||| | |||||||||||||||||||||
Sbjct 552723 GTACTCATTCCAATTACAAGACTCAAAAGAGCCAGACCCGTATCAGTATTTATTGTCACT 552664
Query 57 ACCTCCCCGTGTCGGGATTG-----GGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTG 111
|||||||||||||||||||| ||||| |||||||||||||||| |||||||||
Sbjct 552663 ACCTCCCCGTGTCGGGATTGAATAATATAATTAGCGCGCCTGCTGCCTTGCTTGGATGTA 552604
Query 112 GTA 114
|||
Sbjct 552603 GTA 552601
>seq19
Length=865306
Score = 109 bits (120), Expect = 2e-21
Identities = 62/63 (98%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 5979 GTACTCATTCCAATTACAAGACTCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 6038
Query 61 CCC 63
|||
Sbjct 6039 CCC 6041
>seq5
Length=1928780
Score = 98.7 bits (108), Expect = 3e-18
Identities = 59/61 (97%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 187580 CCATTCGCAGTTTCACAGTATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 187522
Query 482 G 482
|
Sbjct 187521 G 187521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510390590208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |