Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq13 149 2e-33 seq19 109 2e-21 seq5 98.7 3e-18 >seq13 Length=1013014 Score = 149 bits (164), Expect = 2e-33 Identities = 107/123 (87%), Gaps = 9/123 (7%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCC----CTGTATCAGTATTTATTGTCACT 56 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| Sbjct 552723 GTACTCATTCCAATTACAAGACTCAAAAGAGCCAGACCCGTATCAGTATTTATTGTCACT 552664 Query 57 ACCTCCCCGTGTCGGGATTG-----GGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTG 111 |||||||||||||||||||| ||||| |||||||||||||||| ||||||||| Sbjct 552663 ACCTCCCCGTGTCGGGATTGAATAATATAATTAGCGCGCCTGCTGCCTTGCTTGGATGTA 552604 Query 112 GTA 114 ||| Sbjct 552603 GTA 552601 >seq19 Length=865306 Score = 109 bits (120), Expect = 2e-21 Identities = 62/63 (98%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 5979 GTACTCATTCCAATTACAAGACTCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 6038 Query 61 CCC 63 ||| Sbjct 6039 CCC 6041 >seq5 Length=1928780 Score = 98.7 bits (108), Expect = 3e-18 Identities = 59/61 (97%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct 187580 CCATTCGCAGTTTCACAGTATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 187522 Query 482 G 482 | Sbjct 187521 G 187521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510390590208