Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 235 4e-57 >seq3 Length=2126074 Score = 235 bits (260), Expect = 4e-57 Identities = 738/1135 (65%), Gaps = 16/1135 (1%) Strand=Plus/Plus Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866 |||| || || ||||||||||| |||| | |||| || |||||||| |||||| | | Sbjct 691254 AAAGCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAATTGCTCCTT 691313 Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926 || || || |||| || || || |||||||| || || ||||| || | ||| Sbjct 691314 CTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTTCTAACGACC 691373 Query 65927 ACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCC 65985 || || || | ||| | | | || ||||||| || || | || | || | Sbjct 691374 ACTTGGACAACCTCGT-GAAGCTTTTGGAAATCATAAG--TTCCCTCATTCATGT-TGAC 691429 Query 65986 GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGG 66045 | ||| |||| | | |||| || || | ||| ||| ||| | ||| || || Sbjct 691430 G--------AAAGTTGGTA-GAGCAATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGG 691480 Query 66046 AGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTG 66105 || | |||||||| || || ||||||| || || ||| || || || | |||| Sbjct 691481 TGCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTT 691540 Query 66106 TTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAAC 66165 ||| || ||||| ||||||||||| ||||| | |||| | ||| | ||||| || Sbjct 691541 TTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGT 691600 Query 66166 TTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACC 66225 ||| | ||||| || | || ||| || | ||||| | || | | | |||| | Sbjct 691601 TTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGATAGT-CTTGCGACCCTTTC 691659 Query 66226 TTTGCGTT-CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGAC 66284 | | || | ||| ||||||||| || || || || | || || | || || Sbjct 691660 CTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTCCTCGCCATAAACATCTGCCAAAC 691719 Query 66285 ATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAA 66344 || || | | || ||||| || | ||| || |||| || ||| ||||| ||| | Sbjct 691720 CAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGCTTCATGA 691779 Query 66345 ATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGT 66404 | | |||||| ||||| | ||| ||||||||||||||||| || || || | |||| Sbjct 691780 ACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACCGT 691839 Query 66405 GATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGG 66464 | || ||||| | || || ||||| || | |||||||||||||| || ||||| | | Sbjct 691840 GGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAG 691899 Query 66465 CGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGA 66524 | || | ||| |||||| ||||| || || || || | || |||||||| | Sbjct 691900 CAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTTGAAAA 691959 Query 66525 CACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTC 66584 | || | ||| || || | || || || || ||||| || ||| ||||| | || Sbjct 691960 CTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGCACCAG 692019 Query 66585 GTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCAC 66644 || || || ||||| || ||||||||||||||||| |||| ||||| |||| Sbjct 692020 TAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCAC 692079 Query 66645 AATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704 || || || | | || || ||||| || | || ||| | |||| ||| Sbjct 692080 AAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGGAAGC 692139 Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764 | || |||||| | || || || | || || ||||| || || | ||| || |||| Sbjct 692140 ACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATGTGTAA 692199 Query 66765 AGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824 |||| | | ||||| | ||||| || ||||| || || || | || || |||| Sbjct 692200 AGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCGTGAA 692259 Query 66825 TCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATAT 66884 | || | ||| ||||| | | | |||||| || || | | | | | | | Sbjct 692260 TACCCACGGCAACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACCATCAAGAC 692319 Query 66885 GCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | | | || || || || |||||||||| || ||||| ||| |||||||| Sbjct 692320 GTAAAAGATATGATCGCTCAAGGGTCTTGAACCCGAAGTATTGGTAGTTGAAATC 692374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564981340720