Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq3 235 4e-57
>seq3
Length=2126074
Score = 235 bits (260), Expect = 4e-57
Identities = 738/1135 (65%), Gaps = 16/1135 (1%)
Strand=Plus/Plus
Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866
|||| || || ||||||||||| |||| | |||| || |||||||| |||||| | |
Sbjct 691254 AAAGCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAATTGCTCCTT 691313
Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926
|| || || |||| || || || |||||||| || || ||||| || | |||
Sbjct 691314 CTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTTCTAACGACC 691373
Query 65927 ACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCC 65985
|| || || | ||| | | | || ||||||| || || | || | || |
Sbjct 691374 ACTTGGACAACCTCGT-GAAGCTTTTGGAAATCATAAG--TTCCCTCATTCATGT-TGAC 691429
Query 65986 GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGG 66045
| ||| |||| | | |||| || || | ||| ||| ||| | ||| || ||
Sbjct 691430 G--------AAAGTTGGTA-GAGCAATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGG 691480
Query 66046 AGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTG 66105
|| | |||||||| || || ||||||| || || ||| || || || | ||||
Sbjct 691481 TGCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTT 691540
Query 66106 TTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAAC 66165
||| || ||||| ||||||||||| ||||| | |||| | ||| | ||||| ||
Sbjct 691541 TTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGT 691600
Query 66166 TTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACC 66225
||| | ||||| || | || ||| || | ||||| | || | | | |||| |
Sbjct 691601 TTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGATAGT-CTTGCGACCCTTTC 691659
Query 66226 TTTGCGTT-CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGAC 66284
| | || | ||| ||||||||| || || || || | || || | || ||
Sbjct 691660 CTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTCCTCGCCATAAACATCTGCCAAAC 691719
Query 66285 ATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAA 66344
|| || | | || ||||| || | ||| || |||| || ||| ||||| ||| |
Sbjct 691720 CAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGCTTCATGA 691779
Query 66345 ATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGT 66404
| | |||||| ||||| | ||| ||||||||||||||||| || || || | ||||
Sbjct 691780 ACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACCGT 691839
Query 66405 GATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGG 66464
| || ||||| | || || ||||| || | |||||||||||||| || ||||| | |
Sbjct 691840 GGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAG 691899
Query 66465 CGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGA 66524
| || | ||| |||||| ||||| || || || || | || |||||||| |
Sbjct 691900 CAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTTGAAAA 691959
Query 66525 CACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTC 66584
| || | ||| || || | || || || || ||||| || ||| ||||| | ||
Sbjct 691960 CTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGCACCAG 692019
Query 66585 GTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCAC 66644
|| || || ||||| || ||||||||||||||||| |||| ||||| ||||
Sbjct 692020 TAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCAC 692079
Query 66645 AATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704
|| || || | | || || ||||| || | || ||| | |||| |||
Sbjct 692080 AAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGGAAGC 692139
Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764
| || |||||| | || || || | || || ||||| || || | ||| || ||||
Sbjct 692140 ACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATGTGTAA 692199
Query 66765 AGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824
|||| | | ||||| | ||||| || ||||| || || || | || || ||||
Sbjct 692200 AGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCGTGAA 692259
Query 66825 TCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATAT 66884
| || | ||| ||||| | | | |||||| || || | | | | | | |
Sbjct 692260 TACCCACGGCAACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACCATCAAGAC 692319
Query 66885 GCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
| | | || || || || |||||||||| || ||||| ||| ||||||||
Sbjct 692320 GTAAAAGATATGATCGCTCAAGGGTCTTGAACCCGAAGTATTGGTAGTTGAAATC 692374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397564981340720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |