Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465935.1_202015-12-
14] 257 sequences; 43,359,131 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq256 847 0.0
seq195 847 0.0
>seq256
Length=119637
Score = 847 bits (938), Expect = 0.0
Identities = 491/504 (97%), Gaps = 1/504 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 46851 GTACTCATTCCAATTACAAGACTCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 46792
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 46791 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 46732
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 46731 TCTCAGGCTCCTTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 46672
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 46671 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 46612
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||
Sbjct 46611 CAAGGCCATGCGATTCGTTAGGTTATTATGAATCACCAGGGAGCCCCGAAGGGCATTGGT 46552
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 46551 TTTTTATCTAATAAACACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 46492
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 46491 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 46432
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 46431 GCCATTCGCAGTTTCACAGTATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTG 46373
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 46372 AGACAAGCATATGACTACTGGCAG 46349
>seq195
Length=609032
Score = 847 bits (938), Expect = 0.0
Identities = 491/504 (97%), Gaps = 1/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 439847 GTACTCATTCCAATTACAAGACTCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 439906
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 439907 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 439966
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 439967 TCTCAGGCTCCTTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 440026
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440027 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 440086
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||
Sbjct 440087 CAAGGCCATGCGATTCGTTAGGTTATTATGAATCACCAGGGAGCCCCGAAGGGCATTGGT 440146
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 440147 TTTTTATCTAATAAACACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 440206
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440207 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 440266
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 440267 GCCATTCGCAGTTTCACAGTATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTG 440325
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 440326 AGACAAGCATATGACTACTGGCAG 440349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510396118272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |