Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465935.1_202015-12- 14] 257 sequences; 43,359,131 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq256 847 0.0 seq195 847 0.0 >seq256 Length=119637 Score = 847 bits (938), Expect = 0.0 Identities = 491/504 (97%), Gaps = 1/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 46851 GTACTCATTCCAATTACAAGACTCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 46792 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 46791 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 46732 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 46731 TCTCAGGCTCCTTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 46672 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 46671 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 46612 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| Sbjct 46611 CAAGGCCATGCGATTCGTTAGGTTATTATGAATCACCAGGGAGCCCCGAAGGGCATTGGT 46552 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 46551 TTTTTATCTAATAAACACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 46492 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 46491 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 46432 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 46431 GCCATTCGCAGTTTCACAGTATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTG 46373 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 46372 AGACAAGCATATGACTACTGGCAG 46349 >seq195 Length=609032 Score = 847 bits (938), Expect = 0.0 Identities = 491/504 (97%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 439847 GTACTCATTCCAATTACAAGACTCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 439906 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 439907 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 439966 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 439967 TCTCAGGCTCCTTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 440026 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 440027 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 440086 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| Sbjct 440087 CAAGGCCATGCGATTCGTTAGGTTATTATGAATCACCAGGGAGCCCCGAAGGGCATTGGT 440146 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 440147 TTTTTATCTAATAAACACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 440206 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 440207 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 440266 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 440267 GCCATTCGCAGTTTCACAGTATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTG 440325 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 440326 AGACAAGCATATGACTACTGGCAG 440349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510396118272