Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465945.1_202015-12-
14] 231 sequences; 42,266,283 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq71 77.0 5e-12
seq8 77.0 5e-12
>seq71
Length=18436
Score = 77.0 bits (84), Expect = 5e-12
Identities = 70/87 (80%), Gaps = 1/87 (1%)
Strand=Plus/Minus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | | |||||||| |||||||| | |||||
Sbjct 7224 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCA 7165
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 7164 CTCAAACGCCTTCGTATTCTCTACTTG 7138
>seq8
Length=58966
Score = 77.0 bits (84), Expect = 5e-12
Identities = 70/87 (80%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | | |||||||| |||||||| | |||||
Sbjct 7179 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCA 7238
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 7239 CTCAAACGCCTTCGTATTCTCTACTTG 7265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694398446063
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |