Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465945.1_202015-12- 14] 231 sequences; 42,266,283 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq71 89.7 1e-15 >seq71 Length=18436 Score = 89.7 bits (98), Expect = 1e-15 Identities = 191/282 (68%), Gaps = 10/282 (4%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 7558 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 7499 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 7498 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 7439 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGC---TTCGCGTT 179 || | | | || ||||||| || | ||||| ||| |||| ||| | || Sbjct 7438 CCCTCAGAGATAAGGCCGCCATTGATCGGGGTTTCCTTCAAATCCAAGCCTATATTAGTC 7379 Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 | || | || |||||| ||| || |||||| |||||| | |||| | | | Sbjct 7378 AACTTAGAATATTCGTTAACCAGCCGACATTGGGCAGAAATCACACTCAATACTTTGATT 7319 Query 240 T-TCGTGT--TTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | | | |||||||||||| |||||| | |||||||||| Sbjct 7318 TATTATCTTATTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 7277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260797087552