Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465945.1_202015-12-
14] 231 sequences; 42,266,283 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq71 89.7 1e-15
>seq71
Length=18436
Score = 89.7 bits (98), Expect = 1e-15
Identities = 191/282 (68%), Gaps = 10/282 (4%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||| | | ||||||||
Sbjct 7558 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 7499
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 7498 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 7439
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGC---TTCGCGTT 179
|| | | | || ||||||| || | ||||| ||| |||| ||| | ||
Sbjct 7438 CCCTCAGAGATAAGGCCGCCATTGATCGGGGTTTCCTTCAAATCCAAGCCTATATTAGTC 7379
Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239
| || | || |||||| ||| || |||||| |||||| | |||| | | |
Sbjct 7378 AACTTAGAATATTCGTTAACCAGCCGACATTGGGCAGAAATCACACTCAATACTTTGATT 7319
Query 240 T-TCGTGT--TTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | | | |||||||||||| |||||| | ||||||||||
Sbjct 7318 TATTATCTTATTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 7277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260797087552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |