Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08- 07] 15,135 sequences; 48,719,559 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq171 497 4e-138 >seq171 Length=1813 Score = 497 bits (550), Expect = 4e-138 Identities = 314/340 (92%), Gaps = 0/340 (0%) Strand=Plus/Minus Query 344 ATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAA 403 |||| ||| ||||||| |||| ||||||| ||||||||||||||||||||||||||||| Sbjct 1813 ATGCAGCCTACCTGGACCGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAA 1754 Query 404 GCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCA 463 ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| | Sbjct 1753 GCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATTTATGCGAGTGTTTGGGTGTTA 1694 Query 464 AACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACC 523 ||||| | |||| ||||||||||||||||||| |||||| |||||||| ||||||| Sbjct 1693 AACCCATACGCGGAATGAAAGTGAACGGAGGTAAGAACCCTCAAGGGTGCATTATCGACC 1634 Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1633 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAACTGTTGGGACCCGAAAGATGG 1574 Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 ||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1573 TGATCTATACGTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 1514 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||||||||||||||||| |||||||||||| Sbjct 1513 TGACGTGCAAATCGATCGTCAAATTTGCGTATAGGGGCGA 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079675354250