Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq171 497 4e-138
>seq171
Length=1813
Score = 497 bits (550), Expect = 4e-138
Identities = 314/340 (92%), Gaps = 0/340 (0%)
Strand=Plus/Minus
Query 344 ATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAA 403
|||| ||| ||||||| |||| ||||||| |||||||||||||||||||||||||||||
Sbjct 1813 ATGCAGCCTACCTGGACCGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAA 1754
Query 404 GCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCA 463
||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 1753 GCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATTTATGCGAGTGTTTGGGTGTTA 1694
Query 464 AACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACC 523
||||| | |||| ||||||||||||||||||| |||||| |||||||| |||||||
Sbjct 1693 AACCCATACGCGGAATGAAAGTGAACGGAGGTAAGAACCCTCAAGGGTGCATTATCGACC 1634
Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1633 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAACTGTTGGGACCCGAAAGATGG 1574
Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643
||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1573 TGATCTATACGTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 1514
Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| |||||||||||||||||||||||| ||||||||||||
Sbjct 1513 TGACGTGCAAATCGATCGTCAAATTTGCGTATAGGGGCGA 1474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079675354250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |