Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq76 89.7 1e-15
>seq76
Length=10510
Score = 89.7 bits (98), Expect = 1e-15
Identities = 191/282 (68%), Gaps = 10/282 (4%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||| | | ||||||||
Sbjct 4677 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 4736
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 4737 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 4796
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGC---TTCGCGTT 179
|| | | | || ||||||| || | ||||| ||| |||| ||| | ||
Sbjct 4797 CCCTCAGAGATAAGGCCGCCATTGATCGGGGTTTCCTTCAAATCCAAGCCTATATTAGTC 4856
Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239
| || | || |||||| ||| || |||||| |||||| | |||| | | |
Sbjct 4857 AACTTAGAATATTCGTTAACCAGCCGACATTGGGCAGAAATCACACTCAATACTTTGATT 4916
Query 240 T-TCGTGT--TTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | | | |||||||||||| |||||| | ||||||||||
Sbjct 4917 TATTATCTTATTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 4958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260609177920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |