Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08- 07] 15,135 sequences; 48,719,559 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value SEQ13821 107 3e-21 >SEQ13821 Length=874 Score = 107 bits (118), Expect = 3e-21 Identities = 85/102 (83%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||| ||||||||| |||||| ||||||||||||| ||| | Sbjct 106 CCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGGGGCCGCCTTCGCCACCGGTAT 47 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTC 102 |||||| || |||||||||||||||||||||| ||||||| Sbjct 46 TCCTCCAGATCTCTACGCATTTCACCGCTACACCTGGAATTC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828678481085