Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242835.1_202017-08-
07] 15,135 sequences; 48,719,559 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
SEQ14673 277 1e-69
SEQ14127 118 8e-22
>SEQ14673
Length=3941
Score = 277 bits (306), Expect = 1e-69
Identities = 1219/1886 (65%), Gaps = 64/1886 (3%)
Strand=Plus/Plus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
|||||| |||||||| || | | || ||| |||| | || |||||||| |||||
Sbjct 749 ATCGACGGTGAACTGAATAGGTGCGGATGCGGCCATGGTACGGAGGTAGTACATTCCGGT 808
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|||||| || |||| || ||||||||| || | |||| |||| | | | || |
Sbjct 809 CTTGAGACCCAATTTCCAACCAGCGAAATGCATGGAAG-TAATCTTGCCCATTGTGGGGT 867
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || |||| || || ||| || | | |||||| || || ||||
Sbjct 868 CTTTCATGTGAATGTTCATTGATTGTGACTGGTCAACAAAGGCACCACGGTCAGCGGCCA 927
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | || || ||| || |||||||||||||||||||| || | | | | |||
Sbjct 928 TTTGAACAATTGTTCGTTGAGAAATCTCCCAGACGGTCTTGTAAAGT-GCCTTGATGTCA 986
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCA 65372
|||||| | ||||| || | ||||||| ||| || || || || || ||
Sbjct 987 GCTGGAATGTTGGGAATGTTTTGAATAGAACCAC--CGTCAGCGATGATACGGTTCTTCA 1044
Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGAC 65430
| |||||||| || |||| |||| ||||| |||| | || | | || | ||
Sbjct 1045 TGTTGTCTGACCATAATCCCATGTCGACAAGATCCTTGAGC--AGCCATGGGTTAACAAC 1102
Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490
|||||| || || | || |||||||| |||||||| || ||| ||||||||| |
Sbjct 1103 TTGGAATTCTCCAGCCAAGACACGACGAGAGTAGATGTTAGAAGTGTATGGTTCAAAGCA 1162
Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550
|| || || |||||||| | || || |||||||| ||||| || | |||
Sbjct 1163 CTCGTTGAAACCGAGAATTTGAGAGGTGCTGGCTGTTGGCATAGGAGCAACGAGCAAACT 1222
Query 65551 GTTTCGCAATCCGT-TCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGG 65607
||| || | |||| | ||| | || | | ||| ||||||| ||| | ||||
Sbjct 1223 GTTGCGGACACCGTGTTGTTTGATTGATTTCTT-CAAGCTATCCCAGTCCCAAAGGTCGG 1281
Query 65608 TTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667
| | || || ||| ||||||||| | ||| || || | | | |||||
Sbjct 1282 TAGGT-GTA-AC-TCC-----CCACATATCGTATTGAAGTTCGCCCTTCGAGACAGGTGA 1333
Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGA-CAGCTGGTCTCGAGTG 65726
|| | || | || || ||| |||||| |||| | | | | | | || | |
Sbjct 1334 GCCTTCGTAAGTCTCATAGGTACCCAACTCCTTAGCAATCTCAACGGACGATGTCAAA-G 1392
Query 65727 CGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCT--CATC-GCTC- 65782
| || ||||| || ||||| || | || | ||| | |||| | | || | |
Sbjct 1393 CAGCGTGGTAAATAGTTTCGAAGAT---TTGAAT--GTTGAGGTGCTTGGCTTCAGGTGA 1447
Query 65783 -TCGTACGGCATACCCATCAGGACA-AAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840
|| | || | | | | || | |||| ||||| ||||||||||| || | | |||
Sbjct 1448 TTCAAATGGTA-ATCGAAGAGCCAAGAAAGCATCGGCAAGACCTTGAACACCGACAGCGA 1506
Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900
| || |||||||| |||||| ||| ||||| || || |||||||| ||||| || |
Sbjct 1507 TAGGTCGATGACGGAAATTGCTCTTTCTGGCCTCTGGGACGGGGTAGTAGTTGATGTCAA 1566
Query 65901 TAATGCGATTCAAATTGCGTGTCACC-ACATGCACGATACGTCGCAAT--TGTTCGAAAT 65957
| || ||||| || | || || | || || | || ||| | | || |||||
Sbjct 1567 TGATCTTGTTCAAGTTTC-TGACAACGACTTGA--GTAACCTCGTGAAGCTTTTGGAAAT 1623
Query 65958 CAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATG 66017
| || ||| | || || | |||||| | || || |||| || |
Sbjct 1624 CGTAA-GTT-----CCCTCATTCATGTC------CACAAATGTTGGGAGAGCAATGGAAG 1671
Query 66018 CGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGAT 66077
| | ||| ||| ||| | || || || || | || ||||||||||| ||||||| ||
Sbjct 1672 CCAAGTTACAGCAAGCGACTTCATCTGGGGCAGAGTATTCGACAATTTCTGTGCACAAAT 1731
Query 66078 TACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGT 66137
| || ||| |||||||| | |||| ||| |||||||| |||||||||||||||||
Sbjct 1732 TGGAGCTGCGAATGGTGCCGAGGTTCTTTTGGTTACTCTTCTTATTGCATGCATCCTTGT 1791
Query 66138 ACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC 66197
| | |||| | ||| | |||||||| ||| | ||| | |||| || ||||||
Sbjct 1792 AAAGCATGAATGGATTTCCGGTCTCGGTTTGAGCCTCGAGAATGGAGTACCAAAGCTTTT 1851
Query 66198 GTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCG 66256
| || || | || | | | || ||||||| || ||| || ||||| |||
Sbjct 1852 GGGCTTTGATGGT-CTTGCGACCTCTACCTTCCTTCTCATAACTCTCATAGAGAGCTTCA 1910
Query 66257 AAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316
|| || || |||| || | || | ||||| | | || ||||| || | ||||
Sbjct 1911 AACTCGTCGCCATATACATCAGCCAACCCAGGACATTCATTGGGGCACATTAGTGTCCAA 1970
Query 66317 TCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGA 66376
|| | | || ||| ||||| ||| || ||||| || ||||| | ||| ||||| |||
Sbjct 1971 TCCGCGTTCTTTTCAACACGCTTCATGAAGAGATCCGGAATCCACAAGGCATAGAAAAGA 2030
Query 66377 TCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATG 66436
|| || || || || || |||| || || || || | ||| |||||||| || |
Sbjct 2031 TCACGGGCGCGGACTTCTTCCTTGCCATGGTTCTTTCGGAGGTCCAGGAACTCGAAAACA 2090
Query 66437 TCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGG 66496
|| || ||||| || || || |||| || || | || ||| ||| |||||||||
Sbjct 2091 TCTGCGTGCCAAGGCTCAAGATAGACTGCAAATGCACCAGGACGCTTGTTTCCACCTTGG 2150
Query 66497 TCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTG 66556
|||||||| | ||| |||||||| || || | ||| ||||||| ||||| || ||
Sbjct 2151 TCGACGTATCTAGCAGTGTTGTTGAAAACTCGTAGCATGGGTACGATGCCGTTGGAGTTA 2210
Query 66557 CCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATA 66616
|| ||||| ||| ||||| | || || || || ||||| || |||||||||
Sbjct 2211 CCGTTGGTACCGGCGATGTATGCACCAGTGGCACGGATTCTGTGAATGTTGAGACCAATA 2270
Query 66617 CCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAA 66674
|| || || | || ||||| |||||| || | | || |||| || ||||
Sbjct 2271 CCTCCAGCATTTTTAGAGATCATAGCACATGTCTTGAGGGTATCATAAATA--CCATCAA 2328
Query 66675 TGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGG 66734
| ||| |||| || | |||| ||||||| ||| || | || ||||| | |
Sbjct 2329 TACTGTCCTCCTTCATATCAATGAGGAAGCATGATGAAAGCTGAGCTTGTGGTGTACCAG 2388
Query 66735 CCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCT 66794
| ||||| || || || | ||||| || ||||| | | ||||| ||||| ||||
Sbjct 2389 CGGAGAAAAGTGTAGGGGAGGCGTGTGTGAAGTATTTGTTGGACATAAGGTTGTAGGTCT 2448
Query 66795 CGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATT 66854
| ||| | ||||| | || || ||||| || | ||| ||||| | | | ||
Sbjct 2449 CAATGGCGCTCTCAATATCGTCACCGTGAATACCAACGGCAACACGCATGATCATTTGTT 2508
Query 66855 GAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTG 66913
| || ||||| || | ||| | || | | | ||| || || || |||||||||
Sbjct 2509 GTGGACGTTC-TGCAACTTTTCCATCGAGTCGAAGAAGGTACGATCGCTCGAGGGTCTTG 2567
Query 66914 ATACCAAAGTACGAGTAATTGAAATC 66939
| || ||||| ||||||||| ||
Sbjct 2568 AATCCGAAGTATTGGTAATTGAAGTC 2593
>SEQ14127
Length=21342
Score = 118 bits (130), Expect = 8e-22
Identities = 229/334 (69%), Gaps = 7/334 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||||||||| || || || |||||||| | || ||| |||| |||
Sbjct 14037 ATCTGGCAAATGTACAAAAAGGCCGAGGCATCTTTCTGGACAGCAGAAGAGATCGACTTG 14096
Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAAC---ATTTCATTAAA 61203
|| || ||| | | || ||| | | | | ||| | | |||||||
Sbjct 14097 TCAAAGGACCTTCACGATTGGAATAACAAACTCAATGATGATGAGCGCTATTTCATCTCT 14156
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| || | || ||||| || || || ||||| || ||||| ||||| | | || ||
Sbjct 14157 CACGTCCTCGCATTCTTCGCAGCATCCGACGGAATAGTCAACGAGAACCTTGTCGAGCGC 14216
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
||| || || ||| | | ||||| ||||| |||||||| ||||| ||| |||
Sbjct 14217 TTCAGTGGTGAAGTTCAAATCCCCGAGGCTCGTTGCTTCTACGGTTTCCAAATTATGATG 14276
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383
|||||| ||||||| || | ||| | | ||||||||||| ||||||| ||| | ||
Sbjct 14277 GAGAATATCCACTCCGAAACATACTCTCTCCTCATCGATACATACATCAAGGAACAAGCC 14336
Query 61384 GAACGTGAAC-GAT-TGTTCAATGCCATCGAGAC 61415
||| |||| || | |||||||| || |||||
Sbjct 14337 CAAC--GAACATATCTCTTCAATGCAATTGAGAC 14368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397494665476400
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