Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq960 277 3e-72
>seq960
Length=14197
Score = 277 bits (306), Expect = 3e-72
Identities = 201/229 (88%), Gaps = 3/229 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 5372 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 5315
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 5314 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 5255
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| |||| ||||| ||| |||||||| | |||||||||||||||||||
Sbjct 5254 ACCCAGACCTTTCGGTCAAGGAGATGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 5195
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5194 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 5146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751971770625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |