Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08- 07] 3,875 sequences; 36,396,316 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq960 913 0.0 >seq960 Length=14197 Score = 913 bits (1012), Expect = 0.0 Identities = 599/661 (91%), Gaps = 0/661 (0%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 |||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 6280 TGTGAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAAT 6339 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6340 TTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 6399 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 6400 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 6459 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262 |||| ||||||||| | ||||| ||| |||| | | ||||||||||| | | | Sbjct 6460 GCAATCAGACTTGCGCCTAGTTGATCATCCGGGCTTCTGCCCGGTGCACTCGATTAGGCT 6519 Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 |||||||||||| | | ||| ||| |||||||||| ||||| || ||| ||||||||| Sbjct 6520 CAGGCCAGCATCGGTTTGGGTGGTTGGATAAAGGCTTGGGGAACGTAGCCTCCTTCGGGG 6579 Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGG 382 ||||||||||||| |||| ||||| ||| ||||||| |||| ||||||| |||||||| Sbjct 6580 GGTGTTATAGCCCCAGGTGCAATGCAGCCTACCTGGACCGAGGACCGCGCTTCGGCTAGG 6639 Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442 |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 6640 ATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATT 6699 Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 502 ||||||||||||||||||| |||||| | |||||||||||||||||||||||| ||||| Sbjct 6700 TATGCGAGTGTTTGGGTGTTAAACCCATACGCGTAATGAAAGTGAACGGAGGTAAGAACC 6759 Query 503 CGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6760 CTTAAGGGTGCATTATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAA 6819 Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 |||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||| Sbjct 6820 CTGTTGGGACCCGAAAGATGGTGATCTATACGTGAATAGGGTGAAGCCAGAGGAAACTCT 6879 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 6880 GGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGCGTATAGGGGCG 6939 Query 683 A 683 | Sbjct 6940 A 6940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079916881250