Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq960 913 0.0
>seq960
Length=14197
Score = 913 bits (1012), Expect = 0.0
Identities = 599/661 (91%), Gaps = 0/661 (0%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
|||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 6280 TGTGAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAAT 6339
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6340 TTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 6399
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 6400 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 6459
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262
|||| ||||||||| | ||||| ||| |||| | | ||||||||||| | | |
Sbjct 6460 GCAATCAGACTTGCGCCTAGTTGATCATCCGGGCTTCTGCCCGGTGCACTCGATTAGGCT 6519
Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322
|||||||||||| | | ||| ||| |||||||||| ||||| || ||| |||||||||
Sbjct 6520 CAGGCCAGCATCGGTTTGGGTGGTTGGATAAAGGCTTGGGGAACGTAGCCTCCTTCGGGG 6579
Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGG 382
||||||||||||| |||| ||||| ||| ||||||| |||| ||||||| ||||||||
Sbjct 6580 GGTGTTATAGCCCCAGGTGCAATGCAGCCTACCTGGACCGAGGACCGCGCTTCGGCTAGG 6639
Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 6640 ATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATT 6699
Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 502
||||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||
Sbjct 6700 TATGCGAGTGTTTGGGTGTTAAACCCATACGCGTAATGAAAGTGAACGGAGGTAAGAACC 6759
Query 503 CGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562
| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6760 CTTAAGGGTGCATTATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAA 6819
Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622
|||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||
Sbjct 6820 CTGTTGGGACCCGAAAGATGGTGATCTATACGTGAATAGGGTGAAGCCAGAGGAAACTCT 6879
Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 6880 GGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGCGTATAGGGGCG 6939
Query 683 A 683
|
Sbjct 6940 A 6940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079916881250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |