Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08- 07] 3,875 sequences; 36,396,316 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq3519 78.8 3e-12 >seq3519 Length=13112 Score = 78.8 bits (86), Expect = 3e-12 Identities = 112/158 (71%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 330 TGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCA 389 ||||||| | |||||| ||| | |||||||| | |||| | || ||| ||| Sbjct 3854 TGGGCTATAGACGTGCCACATATTCCTATACAAAGAGATGCGATAACGTGAGTATGAGCT 3795 Query 390 AATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGG 449 |||| || ||||| | | | ||||||||||||| || ||||||| ||||| || Sbjct 3794 AATCTCAAAAAGTAGGATAAAATATGGATTGTAGTCTGAAATTCGACTACATGAATAAGG 3735 Query 450 AATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAAT 487 ||| ||||||||||| |||| || | |||||| || Sbjct 3734 AATTACTAGTAATCGTGAATCACCACGTCACGGTGGAT 3697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503941720000