Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq2887 86.0 2e-11
>seq2887
Length=18503
Score = 86.0 bits (94), Expect = 2e-11
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||||||||||||||| ||||| | | | ||||||||||| | ||||| || ||||| |
Sbjct 9946 CAATAGTCATACGAGAAGGAATAGCGTGCGGGTTGATGATAAGATCAGGAACAATGCCTT 10005
Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544
| || || ||||| |||| | | ||| ||| || || |||||||| | |
Sbjct 10006 GACTAGTGAATGGCATGTCTTGTTGCATATATGTGATACCGATAGTACCCTTTTGTCCGT 10065
Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569
||||||||||||||||| || ||
Sbjct 10066 GACGAGAAGCAAACTTGTCACCGAT 10090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884792818335375
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |