Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08- 07] 3,875 sequences; 36,396,316 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2887 86.0 2e-11 >seq2887 Length=18503 Score = 86.0 bits (94), Expect = 2e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||||||||||||||| ||||| | | | ||||||||||| | ||||| || ||||| | Sbjct 9946 CAATAGTCATACGAGAAGGAATAGCGTGCGGGTTGATGATAAGATCAGGAACAATGCCTT 10005 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | || || ||||| |||| | | ||| ||| || || |||||||| | | Sbjct 10006 GACTAGTGAATGGCATGTCTTGTTGCATATATGTGATACCGATAGTACCCTTTTGTCCGT 10065 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 ||||||||||||||||| || || Sbjct 10066 GACGAGAAGCAAACTTGTCACCGAT 10090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884792818335375