Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242905.1_202017-08- 07] 1,637 sequences; 39,468,807 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1608 132 7e-29 seq1055 77.0 5e-12 >seq1608 Length=180168 Score = 132 bits (146), Expect = 7e-29 Identities = 108/127 (85%), Gaps = 3/127 (2%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 |||||| |||||||||||| ||||||| |||| ||||||| ||||||||||| ||| || Sbjct 64480 TACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGTCATT-CC 64423 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTA 120 |||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||| Sbjct 64422 TCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATTA 64363 Query 121 CCCGGAC 127 ||| ||| Sbjct 64362 CCCAGAC 64356 >seq1055 Length=121189 Score = 77.0 bits (84), Expect = 5e-12 Identities = 42/42 (100%), Gaps = 0/42 (0%) Strand=Plus/Minus Query 167 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC 208 |||||||||||||||||||||||||||||||||||||||||| Sbjct 35220 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC 35179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751988074455