Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242905.1_202017-08- 07] 1,637 sequences; 39,468,807 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1608 199 7e-49 seq1055 77.0 6e-12 >seq1608 Length=180168 Score = 199 bits (220), Expect = 7e-49 Identities = 119/125 (95%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 204 GTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCT 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 64356 GTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCT 64415 Query 264 TCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCT 323 ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| | Sbjct 64416 TCAACGAGGAATGACTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCTT 64475 Query 324 TTGTA 328 ||||| Sbjct 64476 TTGTA 64480 >seq1055 Length=121189 Score = 77.0 bits (84), Expect = 6e-12 Identities = 42/42 (100%), Gaps = 0/42 (0%) Strand=Plus/Plus Query 123 GGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164 |||||||||||||||||||||||||||||||||||||||||| Sbjct 35179 GGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 35220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947184494336