Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242905.1_202017-08- 07] 1,637 sequences; 39,468,807 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq991 493 4e-137 >seq991 Length=1049 Score = 493 bits (546), Expect = 4e-137 Identities = 339/377 (90%), Gaps = 7/377 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 679 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 738 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 739 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 798 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||||| |||| ||| | ||| |||||||||||| ||||| Sbjct 799 AGCCCGCGAAGGACCTTAACGCTAGAAGTTGGGCTTTGACACCCAGTTCCGCTTTATTGA 858 Query 187 TTAAGTaaaaaaaCGAT-AAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 ||||| |||||||||| ||||||||||||||||||| || || |||||||| | Sbjct 859 ATAAGT-AAAAAACGATAAAGGGTAGTGGTATTTCAC---CGGCGCTTGCGCTCCCACCT 914 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 |||||||||| | | ||| |||||||| ||| ||||||||||||||||||| |||||| Sbjct 915 ATTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACA-GGTCTT 973 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 974 CTTTCCCCGCTGA-TCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 1032 Query 366 AGGGACAGTGGGAATCT 382 ||||||||||||||||| Sbjct 1033 AGGGACAGTGGGAATCT 1049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635173231776