Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08- 07] 3,610 sequences; 36,184,363 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq379 91.5 4e-16 >seq379 Length=44196 Score = 91.5 bits (100), Expect = 4e-16 Identities = 191/282 (68%), Gaps = 10/282 (4%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 3193 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCANTCATTGAGACAGCNGTTGT 3252 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 3253 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 3312 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGC---TTCGCGTT 179 || | | | || ||||||| || | ||||| ||| |||| ||| | || Sbjct 3313 CCCTCAGAGATAAGGCCGCCATTGATCGGGGTTTCCTTCAAATCCAAGCCTATATTAGTC 3372 Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 | || | || |||||| ||| || |||||| |||||| | |||| | | | Sbjct 3373 AACTTAGAATATTCGTTAACCAGCCGACATTGGGCAGAAATCACACTCAATACTTTGATT 3432 Query 240 T-TCGTGT--TTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | | | |||||||||||| |||||| | |||||||||| Sbjct 3433 TATTATCTTATTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 3474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260754485120