Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08-
07] 3,610 sequences; 36,184,363 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq820 358 1e-96
>seq820
Length=10833
Score = 358 bits (396), Expect = 1e-96
Identities = 203/206 (99%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3714 TACTAAGCTGAATTACCATTGCGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 3773
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3774 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 3833
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3834 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 3893
Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||||||||||||||||||
Sbjct 3894 GAACGCTTGGCTGCCACAAGCCAGTT 3919
Score = 161 bits (178), Expect = 2e-37
Identities = 89/89 (100%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4331 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 4390
Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||
Sbjct 4391 TAGGCCACACTTTCATGGTTTGTATTCAC 4419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854369156160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |