Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08-
07] 3,610 sequences; 36,184,363 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq60 264 9e-66
seq3070 113 4e-20
>seq60
Length=14677
Score = 264 bits (292), Expect = 9e-66
Identities = 1218/1889 (64%), Gaps = 70/1889 (4%)
Strand=Plus/Plus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
|||||| |||||||| || | | || ||| |||| | || |||||||| |||||
Sbjct 7930 ATCGACGGTGAACTGAATAGGTGCGGATGCGGCCATGGTACGGAGGTAGTACATTCCGGT 7989
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|||||| || |||| | ||||||||| || | |||| |||| | | | || |
Sbjct 7990 CTTGAGACCCAATTTCCAACCGGCGAAATGCATGGAAG-TAATCTTGCCCATTGTGGGGT 8048
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || |||| || || ||| || | | ||||||||| || ||||
Sbjct 8049 CTTTCATGTGAATGTTCATTGATTGTGACTGGTCAACAAAGGCACCACGATCAGCGGCCA 8108
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | || || ||| || |||||||||||||||||||| || | | | | |||
Sbjct 8109 TTTGAACAATTGTTCGTTGAGAAATCTCCCAGACGGTCTTGTAAAGT-GCCTTGATGTCA 8167
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCA 65372
|||||| | ||||| || | ||||||| ||| || || ||||| || ||
Sbjct 8168 GCTGGAATGTTGGGAATGTTTTGAATAGAACCAC--CGTCAGCGATGATGCGGTTCTTCA 8225
Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGAC 65430
| |||||||| || |||| |||| ||||| |||| | || | | || | ||
Sbjct 8226 TGTTGTCTGACCATAATCCCATGTCGACAAGATCCTTGAGC--AGCCATGGGTTAACAAC 8283
Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490
|||||| || || | || |||||||| |||||||| || ||| ||||||||| |
Sbjct 8284 TTGGAATTCTCCAGCCAAGACACGACGAGAGTAGATGTTAGAAGTGTATGGTTCAAAGCA 8343
Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550
|| || || |||||||| | || || |||||||| ||||| || | |||
Sbjct 8344 CTCGTTGAAACCGAGAATTTGAGAGGTGCTGGCTGTTGGCATAGGAGCAACGAGCAAACT 8403
Query 65551 GTTTCGCAATCCGT-TCATTTCA---ATGTTGTGACGCAATTCGTCCCAGTTCCACA--T 65604
||| || | |||| | ||| | || | | | || || |||||| ||| | |
Sbjct 8404 GTTGCGGACACCGTGTTGTTTGATGGATTTCTTCAAGCTAT----CCCAGTCCCAAAGGT 8459
Query 65605 CGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGG 65664
|||| | || || ||| ||||||||| | ||| || || | | | ||
Sbjct 8460 CGGTAGGT-GTA-AC-TCC-----CCACATATCGTATTGAAGTTCGCCCTTCGAGACAGG 8511
Query 65665 TGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGA-CAGCTGGTCTCGA 65723
||| || | || | || || ||| |||||| |||| | | | | | | || |
Sbjct 8512 TGAGCCTTCGTAAGTCTCATAGGTACCCAACTCCTTAGCAATCTCAACGGACGATGTCAA 8571
Query 65724 GTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCT--CATC-GC 65780
|| || ||||| || ||||| || | || | ||| | |||| | | || |
Sbjct 8572 A-GCAGCGTGGTAAATAGTTTCGAAGAT---TTGAAT--GTTGAGGTGCTTGGCTTCAGG 8625
Query 65781 TC--TCGTACGGCATACCCATCAGGACA-AAAGTGTCGGCCAGACCTTGAACTCCAATAC 65837
| || | || | | | | || | |||| ||||| ||||||||||| || | |
Sbjct 8626 TGATTCAAATGGTA-ATCGAAGAGCCAAGAAAGCATCGGCAAGACCTTGAACACCGACAG 8684
Query 65838 CGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATAT 65897
|||| || |||||||| |||||| ||| ||||| || || |||||||| ||||| |
Sbjct 8685 CGATAGGTCGATGACGGAAATTGCTCTTTCTGGCCTCTGGGACGGGGTAGTAGTTGATGT 8744
Query 65898 CGATAATGCGATTCAAATTGCGTGTCACC-ACATGCACGATACGTCGCAAT--TGTTCGA 65954
| || || ||||| || | || || | || || | || ||| | | || ||
Sbjct 8745 CAATGATCTTGTTCAAGTTTC-TGACAACGACTTGA--GTAACCTCGTGAAGCTTTTGGA 8801
Query 65955 AATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAG 66014
|||| || ||| | || || | |||||| | || || |||| |
Sbjct 8802 AATCGTAA-GTT-----CCCTCATTCATGTC------CACAAATGTTGGGAGAGCAATGG 8849
Query 66015 ATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA 66074
| || | ||| ||| ||| | || || || || | || ||||||||||| |||||||
Sbjct 8850 AAGCCAAGTTACAGCAAGCGACTTCATCTGGGGCAGAGTATTCGACAATTTCTGTGCACA 8909
Query 66075 GATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCT 66134
||| || ||| |||||||| | |||| ||| || ||||| |||||||||||||
Sbjct 8910 AATTGGAGCTGCGAATGGTGCCGAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCT 8969
Query 66135 TGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAG 66194
|||| | |||| | ||| | |||||||| ||| | ||| | |||| || ||||||
Sbjct 8970 TGTAAAGCATGAATGGATTTCCGGTCTCGGTTTGAGCCTCGAGAATGGAGTACCAAAGCT 9029
Query 66195 CGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGT 66253
| || || | || | | | || ||||||| || ||| || ||||| |
Sbjct 9030 TTTGGGCTTTGATGGT-CTTGCGACCTCTACCTTCCTTCTCATAACTCTCATAGAGAGCT 9088
Query 66254 TCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGAC 66313
|| || || || |||| || | || | ||||| | | || ||||| || | |
Sbjct 9089 TCAAACTCGTCGCCATATACATCAGCCAACCCAGGACATTCATTGGGGCACATTAGTGTC 9148
Query 66314 CAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAG 66373
||||| | | || ||| ||||| ||| || ||||| || ||||| | ||| |||||
Sbjct 9149 CAATCCGCGTTCTTTTCAACACGCTTCATGAAGAGATCCGGAATCCACAAGGCATAGAAA 9208
Query 66374 AGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAG 66433
||||| || || || || || |||| || || || || | ||| |||||||| ||
Sbjct 9209 AGATCACGGGCGCGGACTTCTTCCTTGCCATGGTTCTTTCGAAGGTCCAGGAACTCGAAA 9268
Query 66434 ATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCT 66493
| || || ||||| || || || |||| || || | || ||| ||| ||||||
Sbjct 9269 ACATCTGCGTGCCAAGGCTCAAGATAGACTGCAAATGCACCAGGACGCTTGTTTCCACCT 9328
Query 66494 TGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGAT 66553
||||||||||| | ||| |||||||| || || | ||| ||||||| ||||| ||
Sbjct 9329 TGGTCGACGTATCTAGCAGTGTTGTTGAAAACTCGTAGCATGGGTACGATGCCGTTGGAG 9388
Query 66554 TTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCA 66613
|| || ||||| ||| ||||| | || || || || ||||| || ||||||
Sbjct 9389 TTACCGTTGGTACCGGCGATGTATGCACCAGTGGCACGGATTCTGTGAATGTTGAGACCA 9448
Query 66614 ATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGT 66671
||||| || || | || ||||| |||||| || | | || |||| || |
Sbjct 9449 ATACCTCCAGCATTTTTAGAGATCATAGCACATGTCTTGAGGGTATCATAAATA--CCAT 9506
Query 66672 CAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGG 66731
|||| ||| |||| || | |||| ||||||| ||| || | || |||||
Sbjct 9507 CAATACTGTCCTCCTTCATATCAATGAGGAAGCATGATGAAAGCTGAGCTTGTGGTGTAC 9566
Query 66732 CGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACG 66791
| || ||||| || || || | ||||| || ||||| | | ||||| ||||| |
Sbjct 9567 CAGCGGAGAAAAGTGTAGGGGAGGCGTGTGTGAAGTATTTGTTGGACATAAGGTTGTAGG 9626
Query 66792 TCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGT 66851
|||| ||| | || || | || || ||||| || | ||| ||||| | | |
Sbjct 9627 TCTCAATGGCGCTCTCGATATCGTCACCGTGAATACCAACGGCAACACGCATGATCATTT 9686
Query 66852 ATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTC 66910
||| || ||||| || | ||| | || | | | ||| || || || ||||||
Sbjct 9687 GTTGTGGACGTTC-TGCAACTTTTCCATCGAGTCGAAGAAGGTACGATCGCTCGAGGGTC 9745
Query 66911 TTGATACCAAAGTACGAGTAATTGAAATC 66939
|||| || ||||| ||||||||| ||
Sbjct 9746 TTGAATCCGAAGTATTGGTAATTGAAGTC 9774
>seq3070
Length=35956
Score = 113 bits (124), Expect = 4e-20
Identities = 228/334 (68%), Gaps = 7/334 (2%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||||||||| || || || |||||||| | || ||| |||| |||
Sbjct 29420 ATCTGGCAAATGTACAAAAAGGCCGAGGCATCTTTCTGGACAGCAGAAGAGATCGACTTG 29361
Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAAC---ATTTCATTAAA 61203
|| || ||| | | || ||| | | | | ||| | | |||||||
Sbjct 29360 TCAAAGGACCTTCACGATTGGAATAACAAACTCAATGATGATGAGCGCTATTTCATCTCT 29301
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| || | || ||||| || || || ||||| || ||||| ||||| | | || ||
Sbjct 29300 CACGTCCTCGCATTCTTCGCAGCATCCGACGGAATAGTCAACGAGAACCTTGTCGAGCGC 29241
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
||| || || ||| | | ||||| ||||| |||||||| ||||| ||| |||
Sbjct 29240 TTCAGTGGTGAAGTTCAAATCCCCGAGGCTCGTTGCTTCTACGGTTTCCAAATTATGATG 29181
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383
|||||| ||||||| || | ||| | | ||||||||||| ||||| | ||| | ||
Sbjct 29180 GAGAATATCCACTCCGAAACATACTCTCTCCTCATCGATACATACATTAAGGAACAAGCC 29121
Query 61384 GAACGTGAAC-GAT-TGTTCAATGCCATCGAGAC 61415
||| |||| || | |||||||| || |||||
Sbjct 29120 CAAC--GAACATATCTCTTCAATGCAATTGAGAC 29089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397550508250400
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