Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08- 07] 3,610 sequences; 36,184,363 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq60 264 9e-66 seq3070 113 4e-20 >seq60 Length=14677 Score = 264 bits (292), Expect = 9e-66 Identities = 1218/1889 (64%), Gaps = 70/1889 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| |||||||| || | | || ||| |||| | || |||||||| ||||| Sbjct 7930 ATCGACGGTGAACTGAATAGGTGCGGATGCGGCCATGGTACGGAGGTAGTACATTCCGGT 7989 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| || |||| | ||||||||| || | |||| |||| | | | || | Sbjct 7990 CTTGAGACCCAATTTCCAACCGGCGAAATGCATGGAAG-TAATCTTGCCCATTGTGGGGT 8048 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || |||| || || ||| || | | ||||||||| || |||| Sbjct 8049 CTTTCATGTGAATGTTCATTGATTGTGACTGGTCAACAAAGGCACCACGATCAGCGGCCA 8108 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | || || ||| || |||||||||||||||||||| || | | | | ||| Sbjct 8109 TTTGAACAATTGTTCGTTGAGAAATCTCCCAGACGGTCTTGTAAAGT-GCCTTGATGTCA 8167 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCA 65372 |||||| | ||||| || | ||||||| ||| || || ||||| || || Sbjct 8168 GCTGGAATGTTGGGAATGTTTTGAATAGAACCAC--CGTCAGCGATGATGCGGTTCTTCA 8225 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGAC 65430 | |||||||| || |||| |||| ||||| |||| | || | | || | || Sbjct 8226 TGTTGTCTGACCATAATCCCATGTCGACAAGATCCTTGAGC--AGCCATGGGTTAACAAC 8283 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 |||||| || || | || |||||||| |||||||| || ||| ||||||||| | Sbjct 8284 TTGGAATTCTCCAGCCAAGACACGACGAGAGTAGATGTTAGAAGTGTATGGTTCAAAGCA 8343 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 || || || |||||||| | || || |||||||| ||||| || | ||| Sbjct 8344 CTCGTTGAAACCGAGAATTTGAGAGGTGCTGGCTGTTGGCATAGGAGCAACGAGCAAACT 8403 Query 65551 GTTTCGCAATCCGT-TCATTTCA---ATGTTGTGACGCAATTCGTCCCAGTTCCACA--T 65604 ||| || | |||| | ||| | || | | | || || |||||| ||| | | Sbjct 8404 GTTGCGGACACCGTGTTGTTTGATGGATTTCTTCAAGCTAT----CCCAGTCCCAAAGGT 8459 Query 65605 CGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGG 65664 |||| | || || ||| ||||||||| | ||| || || | | | || Sbjct 8460 CGGTAGGT-GTA-AC-TCC-----CCACATATCGTATTGAAGTTCGCCCTTCGAGACAGG 8511 Query 65665 TGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGA-CAGCTGGTCTCGA 65723 ||| || | || | || || ||| |||||| |||| | | | | | | || | Sbjct 8512 TGAGCCTTCGTAAGTCTCATAGGTACCCAACTCCTTAGCAATCTCAACGGACGATGTCAA 8571 Query 65724 GTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCT--CATC-GC 65780 || || ||||| || ||||| || | || | ||| | |||| | | || | Sbjct 8572 A-GCAGCGTGGTAAATAGTTTCGAAGAT---TTGAAT--GTTGAGGTGCTTGGCTTCAGG 8625 Query 65781 TC--TCGTACGGCATACCCATCAGGACA-AAAGTGTCGGCCAGACCTTGAACTCCAATAC 65837 | || | || | | | | || | |||| ||||| ||||||||||| || | | Sbjct 8626 TGATTCAAATGGTA-ATCGAAGAGCCAAGAAAGCATCGGCAAGACCTTGAACACCGACAG 8684 Query 65838 CGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATAT 65897 |||| || |||||||| |||||| ||| ||||| || || |||||||| ||||| | Sbjct 8685 CGATAGGTCGATGACGGAAATTGCTCTTTCTGGCCTCTGGGACGGGGTAGTAGTTGATGT 8744 Query 65898 CGATAATGCGATTCAAATTGCGTGTCACC-ACATGCACGATACGTCGCAAT--TGTTCGA 65954 | || || ||||| || | || || | || || | || ||| | | || || Sbjct 8745 CAATGATCTTGTTCAAGTTTC-TGACAACGACTTGA--GTAACCTCGTGAAGCTTTTGGA 8801 Query 65955 AATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAG 66014 |||| || ||| | || || | |||||| | || || |||| | Sbjct 8802 AATCGTAA-GTT-----CCCTCATTCATGTC------CACAAATGTTGGGAGAGCAATGG 8849 Query 66015 ATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA 66074 | || | ||| ||| ||| | || || || || | || ||||||||||| ||||||| Sbjct 8850 AAGCCAAGTTACAGCAAGCGACTTCATCTGGGGCAGAGTATTCGACAATTTCTGTGCACA 8909 Query 66075 GATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCT 66134 ||| || ||| |||||||| | |||| ||| || ||||| ||||||||||||| Sbjct 8910 AATTGGAGCTGCGAATGGTGCCGAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCT 8969 Query 66135 TGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAG 66194 |||| | |||| | ||| | |||||||| ||| | ||| | |||| || |||||| Sbjct 8970 TGTAAAGCATGAATGGATTTCCGGTCTCGGTTTGAGCCTCGAGAATGGAGTACCAAAGCT 9029 Query 66195 CGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGT 66253 | || || | || | | | || ||||||| || ||| || ||||| | Sbjct 9030 TTTGGGCTTTGATGGT-CTTGCGACCTCTACCTTCCTTCTCATAACTCTCATAGAGAGCT 9088 Query 66254 TCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGAC 66313 || || || || |||| || | || | ||||| | | || ||||| || | | Sbjct 9089 TCAAACTCGTCGCCATATACATCAGCCAACCCAGGACATTCATTGGGGCACATTAGTGTC 9148 Query 66314 CAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAG 66373 ||||| | | || ||| ||||| ||| || ||||| || ||||| | ||| ||||| Sbjct 9149 CAATCCGCGTTCTTTTCAACACGCTTCATGAAGAGATCCGGAATCCACAAGGCATAGAAA 9208 Query 66374 AGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAG 66433 ||||| || || || || || |||| || || || || | ||| |||||||| || Sbjct 9209 AGATCACGGGCGCGGACTTCTTCCTTGCCATGGTTCTTTCGAAGGTCCAGGAACTCGAAA 9268 Query 66434 ATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCT 66493 | || || ||||| || || || |||| || || | || ||| ||| |||||| Sbjct 9269 ACATCTGCGTGCCAAGGCTCAAGATAGACTGCAAATGCACCAGGACGCTTGTTTCCACCT 9328 Query 66494 TGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGAT 66553 ||||||||||| | ||| |||||||| || || | ||| ||||||| ||||| || Sbjct 9329 TGGTCGACGTATCTAGCAGTGTTGTTGAAAACTCGTAGCATGGGTACGATGCCGTTGGAG 9388 Query 66554 TTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCA 66613 || || ||||| ||| ||||| | || || || || ||||| || |||||| Sbjct 9389 TTACCGTTGGTACCGGCGATGTATGCACCAGTGGCACGGATTCTGTGAATGTTGAGACCA 9448 Query 66614 ATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGT 66671 ||||| || || | || ||||| |||||| || | | || |||| || | Sbjct 9449 ATACCTCCAGCATTTTTAGAGATCATAGCACATGTCTTGAGGGTATCATAAATA--CCAT 9506 Query 66672 CAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGG 66731 |||| ||| |||| || | |||| ||||||| ||| || | || ||||| Sbjct 9507 CAATACTGTCCTCCTTCATATCAATGAGGAAGCATGATGAAAGCTGAGCTTGTGGTGTAC 9566 Query 66732 CGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACG 66791 | || ||||| || || || | ||||| || ||||| | | ||||| ||||| | Sbjct 9567 CAGCGGAGAAAAGTGTAGGGGAGGCGTGTGTGAAGTATTTGTTGGACATAAGGTTGTAGG 9626 Query 66792 TCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGT 66851 |||| ||| | || || | || || ||||| || | ||| ||||| | | | Sbjct 9627 TCTCAATGGCGCTCTCGATATCGTCACCGTGAATACCAACGGCAACACGCATGATCATTT 9686 Query 66852 ATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTC 66910 ||| || ||||| || | ||| | || | | | ||| || || || |||||| Sbjct 9687 GTTGTGGACGTTC-TGCAACTTTTCCATCGAGTCGAAGAAGGTACGATCGCTCGAGGGTC 9745 Query 66911 TTGATACCAAAGTACGAGTAATTGAAATC 66939 |||| || ||||| ||||||||| || Sbjct 9746 TTGAATCCGAAGTATTGGTAATTGAAGTC 9774 >seq3070 Length=35956 Score = 113 bits (124), Expect = 4e-20 Identities = 228/334 (68%), Gaps = 7/334 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||||||||| || || || |||||||| | || ||| |||| ||| Sbjct 29420 ATCTGGCAAATGTACAAAAAGGCCGAGGCATCTTTCTGGACAGCAGAAGAGATCGACTTG 29361 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAAC---ATTTCATTAAA 61203 || || ||| | | || ||| | | | | ||| | | ||||||| Sbjct 29360 TCAAAGGACCTTCACGATTGGAATAACAAACTCAATGATGATGAGCGCTATTTCATCTCT 29301 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || || | || ||||| || || || ||||| || ||||| ||||| | | || || Sbjct 29300 CACGTCCTCGCATTCTTCGCAGCATCCGACGGAATAGTCAACGAGAACCTTGTCGAGCGC 29241 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| || || ||| | | ||||| ||||| |||||||| ||||| ||| ||| Sbjct 29240 TTCAGTGGTGAAGTTCAAATCCCCGAGGCTCGTTGCTTCTACGGTTTCCAAATTATGATG 29181 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 |||||| ||||||| || | ||| | | ||||||||||| ||||| | ||| | || Sbjct 29180 GAGAATATCCACTCCGAAACATACTCTCTCCTCATCGATACATACATTAAGGAACAAGCC 29121 Query 61384 GAACGTGAAC-GAT-TGTTCAATGCCATCGAGAC 61415 ||| |||| || | |||||||| || ||||| Sbjct 29120 CAAC--GAACATATCTCTTCAATGCAATTGAGAC 29089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397550508250400