Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242965.1_202017-08- 07] 3,606 sequences; 37,244,066 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq168 504 1e-140 >seq168 Length=51646 Score = 504 bits (558), Expect = 1e-140 Identities = 297/309 (96%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 6145 GAACGAGACCTTAACCTGCTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 6086 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6085 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 6026 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 6025 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCTCCTTGACCG 5966 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5965 AAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 5906 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 5905 CTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 5846 Query 320 CCCTTTGTA 328 || |||||| Sbjct 5845 CCTTTTGTA 5837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947165843968