Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242985.1_202017-08-
07] 4,789 sequences; 36,003,868 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1315 370 2e-100
>seq1315
Length=9151
Score = 370 bits (410), Expect = 2e-100
Identities = 205/205 (100%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2613 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 2672
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2673 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 2732
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2733 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 2792
Query 271 CCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||
Sbjct 2793 CCACACTTTCATGGTTTGTATTCAC 2817
Score = 152 bits (168), Expect = 9e-35
Identities = 89/92 (97%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2161 TACTAAGCTGAATTACCATTGCGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 2220
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 2221 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 2252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854359082784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |