Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242985.1_202017-08- 07] 4,789 sequences; 36,003,868 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1315 504 1e-140 seq659 361 1e-97 >seq1315 Length=9151 Score = 504 bits (558), Expect = 1e-140 Identities = 297/309 (96%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 6493 GAACGAGACCTTAACCTGCTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 6434 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6433 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 6374 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 6373 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCTCCTTGACCG 6314 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6313 AAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 6254 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 6253 CTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 6194 Query 320 CCCTTTGTA 328 || |||||| Sbjct 6193 CCTTTTGTA 6185 >seq659 Length=65873 Score = 361 bits (400), Expect = 1e-97 Identities = 227/245 (93%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 84 ACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATG 143 |||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 1 ACTATCGGCTCAGCCCGATGGAAGTTTGATGCAATAACAGGTCTTTGATGCCCTTAGATG 60 Query 144 TTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAG 203 ||||||||||||||| ||||||||| |||||| ||||||||||||| || || | | ||| Sbjct 61 TTCTGGGCCGCACGCTCGCTACACTTACAGAGACAACGAGTTCATCTCCGTGACAGAAAG 120 Query 204 GTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCT 263 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTCTGGGTAATCTTATTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCT 180 Query 264 TCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCT 323 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| | Sbjct 181 TCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCTT 240 Query 324 TTGTA 328 ||||| Sbjct 241 TTGTA 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947154638592