Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq179 902 0.0 >seq179 Length=3473 Score = 902 bits (1000), Expect = 0.0 Identities = 602/666 (90%), Gaps = 3/666 (0%) Strand=Plus/Plus Query 19 GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGT 78 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12 GCCGTGTAAAGCCCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGT 71 Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 138 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 72 AAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 131 Query 139 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct 132 AAGATGAAAAGCACTTTGGAAAGAGAGTCAAATAGCACGTGAAATTGTTGAAAGGGAAGC 191 Query 199 GCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTG 258 ||||||| |||||||| || | ||||||| | | || | | || |||||||||||| Sbjct 192 GCTTGCAGCCAGACTTACCTGTAGTTGCTTATCTGGACTTCTGTCCAGTGCACTCTTCTA 251 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 ||| ||||||||||||| | ||||||| ||||||||| | | | | || | |||||| Sbjct 252 CGGGTAGGCCAGCATCAGTTTGGGCGGTTGGATAAAGGTCTCTGTCACGTACCTCCCTTC 311 Query 319 GGGG-GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGG 377 |||| || |||||| | | | |||| || |||||||||||||||||||| | | Sbjct 312 GGGGTGGCCTTATAG-GGGAGACGTCATGCAACCAGCCTGGACTGAGGTCCGCGCATCTG 370 Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 371 CTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTA 430 Query 438 ACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 431 ACATCTATGCGAGTGTTTGGGTGTCAAGCCCAGACGCGTAATGAAAGTGAACGGAGGTGG 490 Query 498 GAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 491 GAACCC-TTTGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 549 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 550 CATGGCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGAATAGGGTGAAGCCAGAGGAA 609 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 610 ACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGCATAG 669 Query 678 GGGCGA 683 |||||| Sbjct 670 GGGCGA 675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079993822400