Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21]
288 sequences; 32,067,383 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq179 902 0.0
>seq179
Length=3473
Score = 902 bits (1000), Expect = 0.0
Identities = 602/666 (90%), Gaps = 3/666 (0%)
Strand=Plus/Plus
Query 19 GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGT 78
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12 GCCGTGTAAAGCCCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGT 71
Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 138
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 72 AAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 131
Query 139 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 132 AAGATGAAAAGCACTTTGGAAAGAGAGTCAAATAGCACGTGAAATTGTTGAAAGGGAAGC 191
Query 199 GCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTG 258
||||||| |||||||| || | ||||||| | | || | | || ||||||||||||
Sbjct 192 GCTTGCAGCCAGACTTACCTGTAGTTGCTTATCTGGACTTCTGTCCAGTGCACTCTTCTA 251
Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
||| ||||||||||||| | ||||||| ||||||||| | | | | || | ||||||
Sbjct 252 CGGGTAGGCCAGCATCAGTTTGGGCGGTTGGATAAAGGTCTCTGTCACGTACCTCCCTTC 311
Query 319 GGGG-GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGG 377
|||| || |||||| | | | |||| || |||||||||||||||||||| | |
Sbjct 312 GGGGTGGCCTTATAG-GGGAGACGTCATGCAACCAGCCTGGACTGAGGTCCGCGCATCTG 370
Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 371 CTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTA 430
Query 438 ACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 431 ACATCTATGCGAGTGTTTGGGTGTCAAGCCCAGACGCGTAATGAAAGTGAACGGAGGTGG 490
Query 498 GAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 491 GAACCC-TTTGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 549
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 550 CATGGCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGAATAGGGTGAAGCCAGAGGAA 609
Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 610 ACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGCATAG 669
Query 678 GGGCGA 683
||||||
Sbjct 670 GGGCGA 675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079993822400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |