Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21]
288 sequences; 32,067,383 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq100 95.1 3e-17
>seq100
Length=21735
Score = 95.1 bits (104), Expect = 3e-17
Identities = 274/419 (65%), Gaps = 27/419 (6%)
Strand=Plus/Plus
Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74
|||||||| || ||| || |||||||||| | | |||||||| |||||| |
Sbjct 11629 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGCATCGTGAG 11688
Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134
||||| ||| | | | ||| | ||||| ||||||||||||||||||| | ||
Sbjct 11689 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTCATA 11748
Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC---GTTAG----CTAACC 187
| || ||||||| || | |||| ||| |||| | || | |||| ||||
Sbjct 11749 GGTAAGGCCGCCATTAAATGGGGGTTCCTTCAAAACCTAGACTATTTTAGTCGTCTAAGT 11808
Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247
||| |||||| || || |||||| | ||| |||||| | | || | | ||
Sbjct 11809 AAATCCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACATTGATTTACATCTT 11868
Query 248 -TGCAGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCT----GGTATCTTCGACC 300
||| ||||||||||||| | ||||||||| ||| | | | || || || ||
Sbjct 11869 ACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCTCCTCTTCC 11928
Query 301 GGCA-TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359
|| ||| ||| || | | | ||| ||||||||||| ||||||
Sbjct 11929 TACACTGATATTAATCAGTAGG------------AATGGCACACCTTCTCCCTCAGTTAC 11976
Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418
|||| | |||||| |||||||| ||| ||||| |||||| |||||||||||
Sbjct 11977 GGTGTCAATTTGCCGAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 12035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260796368896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |