Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq100 95.1 3e-17 >seq100 Length=21735 Score = 95.1 bits (104), Expect = 3e-17 Identities = 274/419 (65%), Gaps = 27/419 (6%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||| || ||| || |||||||||| | | |||||||| |||||| | Sbjct 11629 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGCATCGTGAG 11688 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||||| ||| | | | ||| | ||||| ||||||||||||||||||| | || Sbjct 11689 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTCATA 11748 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC---GTTAG----CTAACC 187 | || ||||||| || | |||| ||| |||| | || | |||| |||| Sbjct 11749 GGTAAGGCCGCCATTAAATGGGGGTTCCTTCAAAACCTAGACTATTTTAGTCGTCTAAGT 11808 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 ||| |||||| || || |||||| | ||| |||||| | | || | | || Sbjct 11809 AAATCCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACATTGATTTACATCTT 11868 Query 248 -TGCAGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCT----GGTATCTTCGACC 300 ||| ||||||||||||| | ||||||||| ||| | | | || || || || Sbjct 11869 ACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCTCCTCTTCC 11928 Query 301 GGCA-TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359 || ||| ||| || | | | ||| ||||||||||| |||||| Sbjct 11929 TACACTGATATTAATCAGTAGG------------AATGGCACACCTTCTCCCTCAGTTAC 11976 Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 |||| | |||||| |||||||| ||| ||||| |||||| ||||||||||| Sbjct 11977 GGTGTCAATTTGCCGAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 12035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260796368896