Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21]
288 sequences; 32,067,383 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq100 78.8 2e-12
>seq100
Length=21735
Score = 78.8 bits (86), Expect = 2e-12
Identities = 258/390 (66%), Gaps = 46/390 (12%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64
|||||||| | ||| || |||||| ||| | || ||||||||| ||| ||||
Sbjct 11629 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGC----ATCG 11684
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
| | | ||| |||| | | | ||| | ||||| ||||||||||||||||||| |
Sbjct 11685 TGAGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 11744
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT----GCTTCGATTGCTC 176
|||| || ||||||| || | ||||| || |||| || || | | ||
Sbjct 11745 CATAGGTAAGGCCGCCATTAAATGGGGGTT-CCTTCAAAACCTAGACTATTTTAGTCGTC 11803
Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCT 233
||| | || |||||| ||| || |||||| ||| || || |||||||| | |
Sbjct 11804 TAAGTAAATCCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACATTGATT 11860
Query 234 TGCGACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCG-----------CTTGGGCCT 281
| | |||| ||| | ||||||||| |||||||||| || | ||
Sbjct 11861 TACATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCT 11920
Query 282 ATTCTCTGCGGC-CTG-------TCA-TA-GACAGGCACCCCTTCTCCCTAAGTTACGGG 331
||| | | | ||| ||| || || ||||| |||||||||| ||||||||
Sbjct 11921 CCTCT-TCCTACACTGATATTAATCAGTAGGAATGGCACACCTTCTCCCTCAGTTACGGT 11979
Query 332 GTCATTTTGCCGAGTTCCTTAACAATAGTT 361
|||| ||||||||||||||||| || |||
Sbjct 11980 GTCAATTTGCCGAGTTCCTTAATGATTGTT 12009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062396940288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |