Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq100 78.8 2e-12 >seq100 Length=21735 Score = 78.8 bits (86), Expect = 2e-12 Identities = 258/390 (66%), Gaps = 46/390 (12%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64 |||||||| | ||| || |||||| ||| | || ||||||||| ||| |||| Sbjct 11629 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGC----ATCG 11684 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 | | | ||| |||| | | | ||| | ||||| ||||||||||||||||||| | Sbjct 11685 TGAGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 11744 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT----GCTTCGATTGCTC 176 |||| || ||||||| || | ||||| || |||| || || | | || Sbjct 11745 CATAGGTAAGGCCGCCATTAAATGGGGGTT-CCTTCAAAACCTAGACTATTTTAGTCGTC 11803 Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCT 233 ||| | || |||||| ||| || |||||| ||| || || |||||||| | | Sbjct 11804 TAAGTAAATCCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACATTGATT 11860 Query 234 TGCGACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCG-----------CTTGGGCCT 281 | | |||| ||| | ||||||||| |||||||||| || | || Sbjct 11861 TACATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCT 11920 Query 282 ATTCTCTGCGGC-CTG-------TCA-TA-GACAGGCACCCCTTCTCCCTAAGTTACGGG 331 ||| | | | ||| ||| || || ||||| |||||||||| |||||||| Sbjct 11921 CCTCT-TCCTACACTGATATTAATCAGTAGGAATGGCACACCTTCTCCCTCAGTTACGGT 11979 Query 332 GTCATTTTGCCGAGTTCCTTAACAATAGTT 361 |||| ||||||||||||||||| || ||| Sbjct 11980 GTCAATTTGCCGAGTTCCTTAATGATTGTT 12009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062396940288