Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq172 78.8 3e-12 >seq172 Length=3647 Score = 78.8 bits (86), Expect = 3e-12 Identities = 138/195 (71%), Gaps = 7/195 (4%) Strand=Plus/Plus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | | Sbjct 2047 GGGACTAAGACAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATGCC 2106 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 ||||||||| || | | |||| | ||| |||||| ||| | | ||| | Sbjct 2107 TTTACAAAGGGATGCAATAATGCGAATTGGAGCTAATCCCTAAAACAGGATAA-AGTATG 2165 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGT-AG--ATCAG 472 |||||||||||| || |||||| ||||| ||||| ||||||||||| || |||| Sbjct 2166 GATTGTAGTCTGAAATTCGACTGCATGAAAAAGGAATTACTAGTAATCGTGAGTAATCA- 2224 Query 473 CATGCTACGGTGAAT 487 ||| ||||||||| Sbjct 2225 CAT--CACGGTGAAT 2237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503995668480