Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21]
288 sequences; 32,067,383 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq180 170 2e-40
>seq180
Length=3448
Score = 170 bits (188), Expect = 2e-40
Identities = 171/214 (80%), Gaps = 6/214 (3%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 1345 CTAGAAACCAACAAAATAGGACCGCACGTCCTATTCTATTATTCCATGCTAACGTATTCG 1404
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| |||| ||||||||||||| ||| | ||
Sbjct 1405 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGG-TCCCCAACA 1463
Query 126 C-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
| ||| |||| ||||| || || ||| ||| ||| | || ||||| |||
Sbjct 1464 CGCCCAGTGAAGGGCAT-GAGGTTCTCCAGAAGGAAGGCCCGGCCGGACAAGTACACGCG 1522
Query 184 GTGAGGCGGACCATAGCACCCAG-CCCGAGTTTC 216
|||||||||||| | || |||| ||| || |||
Sbjct 1523 GTGAGGCGGACC-TGCCAGCCAGACCCAAGGTTC 1555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595198339392
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