Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq180 170 2e-40 >seq180 Length=3448 Score = 170 bits (188), Expect = 2e-40 Identities = 171/214 (80%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 1345 CTAGAAACCAACAAAATAGGACCGCACGTCCTATTCTATTATTCCATGCTAACGTATTCG 1404 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| |||| ||||||||||||| ||| | || Sbjct 1405 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGG-TCCCCAACA 1463 Query 126 C-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183 | ||| |||| ||||| || || ||| ||| ||| | || ||||| ||| Sbjct 1464 CGCCCAGTGAAGGGCAT-GAGGTTCTCCAGAAGGAAGGCCCGGCCGGACAAGTACACGCG 1522 Query 184 GTGAGGCGGACCATAGCACCCAG-CCCGAGTTTC 216 |||||||||||| | || |||| ||| || ||| Sbjct 1523 GTGAGGCGGACC-TGCCAGCCAGACCCAAGGTTC 1555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595198339392