Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21]
288 sequences; 32,067,383 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq179 289 5e-76
>seq179
Length=3473
Score = 289 bits (320), Expect = 5e-76
Identities = 235/279 (84%), Gaps = 8/279 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |
Sbjct 2737 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 2794
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2795 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2854
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179
||||||||||||| | ||||||| ||||||||||||||||| ||| ||||| |||
Sbjct 2855 GAACGGGGTGATTTCCGCCTGCAC----CAGTCGGATACGAATAGGCCTTTGGCCCAGAA 2910
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
||||| ||| | || || | || |||| ||| ||| |||||| | |||||
Sbjct 2911 CCTTACCAGATCAGCGTTGGCAGCTCCATGGAAATTGGGGCTGCT-AGCTGGTGTATTGC 2969
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| || |||||||| | |||||||||||||||||
Sbjct 2970 AATTGTACAGTGCGCAGGATTGAATCCTTTGCAGACGAC 3008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819197714432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |