Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21]
288 sequences; 32,067,383 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq180 820 0.0
>seq180
Length=3448
Score = 820 bits (908), Expect = 0.0
Identities = 485/504 (96%), Gaps = 1/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1670 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 1729
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1730 CCCCGTATTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1789
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1790 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1849
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| || | ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1850 AGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCGTCGCCGGCG 1909
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||
Sbjct 1910 CAAGGCCATGCGATCCGTAAAGTTATCATGAATCACCAAGAAGCCCCGAAGGGCGTTGGT 1969
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct 1970 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGAGGTTGTAAGCATGTATTAGCTCTAG 2029
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2030 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 2089
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2090 GCCATTCGCAGTTTCACGGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 2148
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 2149 AGACAAGCATATGACTACTGGCAG 2172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510395650048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |