Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1 251 1e-64 >seq1 Length=6771991 Score = 251 bits (278), Expect = 1e-64 Identities = 230/280 (82%), Gaps = 9/280 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| |||||||||||||||| |||| |||| |||||| Sbjct 5672590 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 5672647 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 5672648 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 5672707 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| || || | |||| |||| | | || ||||| |||||||| |||||| || | Sbjct 5672708 GAACGCGGCGACAC-CTCCCGCACGTTGCAGACGGATCAGAATAGGCCTCGGCCTCGTAT 5672766 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 |||||||||| | | | || | || ||||| || |||| || | ||| ||||| Sbjct 5672767 CTTAGCAGGC--GGTTCCGCCGCCGGGCTGGAAGTGCCCGGCGGTCTTC-CGCGTATTGC 5672823 Query 240 AATTTCACCATGCGCAGGGAT-AAATCCTTTGCAGACGAC 278 |||||| || |||| ||||| |||||||||||||||||| Sbjct 5672824 AATTTCGACACGCGC-GGGATCAAATCCTTTGCAGACGAC 5672862 Score = 187 bits (206), Expect = 4e-45 Identities = 172/213 (81%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 34 GTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTG 93 |||||||||| |||| |||| ||||||||||||| ||||||||||||||||| ||||||| Sbjct 5664580 GTTTTTGCGGTTGTCCGACCGGGCAGTGCCGCGACGCTACCATCTGCTGGATAATGGCTG 5664639 Query 94 AACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTC 153 |||||||||||||||||||||||||||||||| || || | |||| |||| | | || | Sbjct 5664640 AACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGACAC-CTCCCGCACGTTGCAGAC 5664698 Query 154 GGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAA 212 |||| |||||||| |||||| || | |||||||||| | | | || | || |||| Sbjct 5664699 GGATCAGAATAGGCCTCGGCCTCGTATCTTAGCAGGC--GGTTCCGCCGCCGGGCTGGAA 5664756 Query 213 GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTC 245 | || |||| || | ||| ||||||||||| Sbjct 5664757 GTGCCCGGCGGTCTTC-CGCGTATTGCAATTTC 5664788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199809536