Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25]
24 sequences; 33,473,551 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1 251 1e-64
>seq1
Length=6771991
Score = 251 bits (278), Expect = 1e-64
Identities = 230/280 (82%), Gaps = 9/280 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| |||| ||||||
Sbjct 5672590 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 5672647
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 5672648 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 5672707
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| || || | |||| |||| | | || ||||| |||||||| |||||| || |
Sbjct 5672708 GAACGCGGCGACAC-CTCCCGCACGTTGCAGACGGATCAGAATAGGCCTCGGCCTCGTAT 5672766
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||||||| | | | || | || ||||| || |||| || | ||| |||||
Sbjct 5672767 CTTAGCAGGC--GGTTCCGCCGCCGGGCTGGAAGTGCCCGGCGGTCTTC-CGCGTATTGC 5672823
Query 240 AATTTCACCATGCGCAGGGAT-AAATCCTTTGCAGACGAC 278
|||||| || |||| ||||| ||||||||||||||||||
Sbjct 5672824 AATTTCGACACGCGC-GGGATCAAATCCTTTGCAGACGAC 5672862
Score = 187 bits (206), Expect = 4e-45
Identities = 172/213 (81%), Gaps = 5/213 (2%)
Strand=Plus/Plus
Query 34 GTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTG 93
|||||||||| |||| |||| ||||||||||||| ||||||||||||||||| |||||||
Sbjct 5664580 GTTTTTGCGGTTGTCCGACCGGGCAGTGCCGCGACGCTACCATCTGCTGGATAATGGCTG 5664639
Query 94 AACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTC 153
|||||||||||||||||||||||||||||||| || || | |||| |||| | | || |
Sbjct 5664640 AACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGACAC-CTCCCGCACGTTGCAGAC 5664698
Query 154 GGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAA 212
|||| |||||||| |||||| || | |||||||||| | | | || | || ||||
Sbjct 5664699 GGATCAGAATAGGCCTCGGCCTCGTATCTTAGCAGGC--GGTTCCGCCGCCGGGCTGGAA 5664756
Query 213 GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTC 245
| || |||| || | ||| |||||||||||
Sbjct 5664757 GTGCCCGGCGGTCTTC-CGCGTATTGCAATTTC 5664788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199809536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |