Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25]
19 sequences; 33,493,113 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 3e-35
seq11 125 4e-27
>seq1
Length=9646222
Score = 152 bits (168), Expect = 3e-35
Identities = 106/118 (90%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||| | |||| | |||| |||||||||||| |||||||||| ||||||||| |
Sbjct 3723508 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTC 3723450
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3723449 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3723392
>seq11
Length=507
Score = 125 bits (138), Expect = 4e-27
Identities = 100/118 (85%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCC 59
||||||||| ||||||||||||| ||||||||| ||| ||||| || |||||| |
Sbjct 297 GAACCCAAAAACTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATCCGC 355
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 356 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278399950410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |