Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25]
19 sequences; 33,493,113 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1 495 7e-138
seq11 122 2e-25
>seq1
Length=9646222
Score = 495 bits (548), Expect = 7e-138
Identities = 299/314 (95%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||| |||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct 3723078 TGGTCCGGCCGGGTCTTTCCCTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 3723137
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||
Sbjct 3723138 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCTCGGATACAT 3723197
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3723198 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 3723257
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3723258 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 3723317
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 3723318 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 3723376
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 3723377 ACGAAAGTTAGGGG 3723390
>seq11
Length=507
Score = 122 bits (134), Expect = 2e-25
Identities = 84/94 (89%), Gaps = 1/94 (1%)
Strand=Plus/Minus
Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284
|||||||||||||||||||||||||| ||||| ||| ||||||||||| || ||||||
Sbjct 507 GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGG 448
Query 285 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||||||||| ||||||||||| ||||
Sbjct 447 ATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199826112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |