Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25]
19 sequences; 33,493,113 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1 342 8e-92
seq11 187 4e-45
>seq1
Length=9646222
Score = 342 bits (378), Expect = 8e-92
Identities = 233/258 (90%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3723891 ACTCGCTGGCTCTGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3723832
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 3723831 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGCG 3723773
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || | | | |||||||||||||||||||||||||||||||||||| ||||
Sbjct 3723772 CGCTGCCAAAG-CAACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCGATTA 3723714
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3723713 GGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACGAAATCAAGA 3723654
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 3723653 AAGAGCTCTCAATCTGTC 3723636
>seq11
Length=507
Score = 187 bits (206), Expect = 4e-45
Identities = 139/162 (86%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 99 ATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTA 156
|||||||||||||||||| ||| || || || | |||| |||||||| |
Sbjct 8 ATAGTCCCTCTAAGAAGCTGGCCGTGAAGGGTATCCTCCACATAGCTAGTTAGCAGGCTG 67
Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 68 AGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 127
Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 128 GCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTC 169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799853339
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |