Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25] 19 sequences; 33,493,113 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1 251 1e-64 seq7 217 2e-54 >seq1 Length=9646222 Score = 251 bits (278), Expect = 1e-64 Identities = 230/280 (82%), Gaps = 9/280 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| |||||||||||||||| |||| |||| |||||| Sbjct 3727715 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 3727772 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3727773 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 3727832 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| || || | |||| |||| | | || ||||| |||||||| |||||| || | Sbjct 3727833 GAACGCGGCGACAC-CTCCCGCACGTTGCAGACGGATCAGAATAGGCCTCGGCCTCGTAT 3727891 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 |||||||||| | | | || | || ||||| || |||| || | ||| ||||| Sbjct 3727892 CTTAGCAGGC--GGTTCCGCCGCCGGGCTGGAAGTGCCCGGCGGTCTTC-CGCGTATTGC 3727948 Query 240 AATTTCACCATGCGCAGGGAT-AAATCCTTTGCAGACGAC 278 |||||| || |||| ||||| |||||||||||||||||| Sbjct 3727949 AATTTCGACACGCGC-GGGATCAAATCCTTTGCAGACGAC 3727987 Score = 217 bits (240), Expect = 2e-54 Identities = 201/247 (81%), Gaps = 7/247 (3%) Strand=Plus/Plus Query 34 GTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTG 93 |||||||||| |||| |||| ||||||||||||| ||||||||||||||||| ||||||| Sbjct 3719877 GTTTTTGCGGTTGTCCGACCGGGCAGTGCCGCGACGCTACCATCTGCTGGATAATGGCTG 3719936 Query 94 AACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTC 153 |||||||||||||||||||||||||||||||| || || | |||| |||| | | || | Sbjct 3719937 AACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGACAC-CTCCCGCACGTTGCAGAC 3719995 Query 154 GGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAA 212 |||| |||||||| |||||| || | |||||||||| | | | || | || |||| Sbjct 3719996 GGATCAGAATAGGCCTCGGCCTCGTATCTTAGCAGGC--GGTTCCGCCGCCGGGCTGGAA 3720053 Query 213 GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGAT-AAATCCTTTGC 271 | || |||| || | ||| ||||||||||| || |||| ||||| ||||||||||| Sbjct 3720054 GTGCCCGGCGGTCTTC-CGCGTATTGCAATTTCGACACGCGC-GGGATCAAATCCTTTGC 3720111 Query 272 AGACGAC 278 ||||||| Sbjct 3720112 AGACGAC 3720118 >seq7 Length=765 Score = 217 bits (240), Expect = 2e-54 Identities = 201/247 (81%), Gaps = 7/247 (3%) Strand=Plus/Minus Query 34 GTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTG 93 |||||||||| |||| |||| ||||||||||||| ||||||||||||||||| ||||||| Sbjct 765 GTTTTTGCGGTTGTCCGACCGGGCAGTGCCGCGACGCTACCATCTGCTGGATAATGGCTG 706 Query 94 AACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTC 153 |||||||||||||||||||||||||||||||| || || | |||| |||| | | || | Sbjct 705 AACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGACAC-CTCCCGCACGTTGCAGAC 647 Query 154 GGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAA 212 |||| |||||||| |||||| || | |||||||||| | | | || | || |||| Sbjct 646 GGATCAGAATAGGCCTCGGCCTCGTATCTTAGCAGGC--GGTTCCGCCGCCGGGCTGGAA 589 Query 213 GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGAT-AAATCCTTTGC 271 | || |||| || | ||| ||||||||||| || |||| ||||| ||||||||||| Sbjct 588 GTGCCCGGCGGTCTTC-CGCGTATTGCAATTTCGACACGCGC-GGGATCAAATCCTTTGC 531 Query 272 AGACGAC 278 ||||||| Sbjct 530 AGACGAC 524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199849216