Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630445.1_202016-04-25]
19 sequences; 33,493,113 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1 251 1e-64
seq7 217 2e-54
>seq1
Length=9646222
Score = 251 bits (278), Expect = 1e-64
Identities = 230/280 (82%), Gaps = 9/280 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| |||| ||||||
Sbjct 3727715 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 3727772
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3727773 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 3727832
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| || || | |||| |||| | | || ||||| |||||||| |||||| || |
Sbjct 3727833 GAACGCGGCGACAC-CTCCCGCACGTTGCAGACGGATCAGAATAGGCCTCGGCCTCGTAT 3727891
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||||||| | | | || | || ||||| || |||| || | ||| |||||
Sbjct 3727892 CTTAGCAGGC--GGTTCCGCCGCCGGGCTGGAAGTGCCCGGCGGTCTTC-CGCGTATTGC 3727948
Query 240 AATTTCACCATGCGCAGGGAT-AAATCCTTTGCAGACGAC 278
|||||| || |||| ||||| ||||||||||||||||||
Sbjct 3727949 AATTTCGACACGCGC-GGGATCAAATCCTTTGCAGACGAC 3727987
Score = 217 bits (240), Expect = 2e-54
Identities = 201/247 (81%), Gaps = 7/247 (3%)
Strand=Plus/Plus
Query 34 GTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTG 93
|||||||||| |||| |||| ||||||||||||| ||||||||||||||||| |||||||
Sbjct 3719877 GTTTTTGCGGTTGTCCGACCGGGCAGTGCCGCGACGCTACCATCTGCTGGATAATGGCTG 3719936
Query 94 AACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTC 153
|||||||||||||||||||||||||||||||| || || | |||| |||| | | || |
Sbjct 3719937 AACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGACAC-CTCCCGCACGTTGCAGAC 3719995
Query 154 GGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAA 212
|||| |||||||| |||||| || | |||||||||| | | | || | || ||||
Sbjct 3719996 GGATCAGAATAGGCCTCGGCCTCGTATCTTAGCAGGC--GGTTCCGCCGCCGGGCTGGAA 3720053
Query 213 GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGAT-AAATCCTTTGC 271
| || |||| || | ||| ||||||||||| || |||| ||||| |||||||||||
Sbjct 3720054 GTGCCCGGCGGTCTTC-CGCGTATTGCAATTTCGACACGCGC-GGGATCAAATCCTTTGC 3720111
Query 272 AGACGAC 278
|||||||
Sbjct 3720112 AGACGAC 3720118
>seq7
Length=765
Score = 217 bits (240), Expect = 2e-54
Identities = 201/247 (81%), Gaps = 7/247 (3%)
Strand=Plus/Minus
Query 34 GTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTG 93
|||||||||| |||| |||| ||||||||||||| ||||||||||||||||| |||||||
Sbjct 765 GTTTTTGCGGTTGTCCGACCGGGCAGTGCCGCGACGCTACCATCTGCTGGATAATGGCTG 706
Query 94 AACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTC 153
|||||||||||||||||||||||||||||||| || || | |||| |||| | | || |
Sbjct 705 AACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGACAC-CTCCCGCACGTTGCAGAC 647
Query 154 GGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAA 212
|||| |||||||| |||||| || | |||||||||| | | | || | || ||||
Sbjct 646 GGATCAGAATAGGCCTCGGCCTCGTATCTTAGCAGGC--GGTTCCGCCGCCGGGCTGGAA 589
Query 213 GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGAT-AAATCCTTTGC 271
| || |||| || | ||| ||||||||||| || |||| ||||| |||||||||||
Sbjct 588 GTGCCCGGCGGTCTTC-CGCGTATTGCAATTTCGACACGCGC-GGGATCAAATCCTTTGC 531
Query 272 AGACGAC 278
|||||||
Sbjct 530 AGACGAC 524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199849216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |