Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq211 461 6e-125 seq16 120 2e-22 >seq211 Length=310440 Score = 461 bits (510), Expect = 6e-125 Identities = 1260/1895 (66%), Gaps = 80/1895 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||||||||| | | ||||| |||| || | || ||||||||||| || Sbjct 28594 ATCAACAGTGAACTGGATGGGCTGGGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGT 28653 Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||| || ||| ||| | ||| ||||| | || | || |||| | ||||| Sbjct 28654 CTTGAGACCCAGCTT-CCAGCCGGTGAAGTGCAT-GCTGGTGATCTTGCCCATGGTCGGC 28711 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGC 65253 || || || || || | |||||| ||| ||||| |||| |||||| || || || Sbjct 28712 TCACGCATGTGGATGTTGAGCGACTGCGACTGGTCGATA-AACGCACCACGGTCGGCGGC 28770 Query 65254 CATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTAC-CT 65312 ||| | | || ||| ||| |||||||| || ||||||||||| | | | || Sbjct 28771 CATCTGCACAATTGTGCGTTGCGAGATCTCCCACACAGTCTTGTACAGA-GCCTTGGTCT 28829 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372 || || || | |||| ||||| ||||| | ||||| ||||| || || Sbjct 28830 CAGCGGGGATGTTAGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCA 28889 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGAC 65430 | || ||||||| |||| |||| || | |||| | || ||| || | ||| Sbjct 28890 TGTTGTCCGACCACAGGCCCATGTCGACCAGGTCCTTGAGC--AGCCACGGGTTCACGAC 28947 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 ||||||||||||| ||| ||||| || ||||||||||||||| ||| || ||| | Sbjct 28948 CTGGAACTCGCCGGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTAGGGCTCGAAGCA 29007 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 || ||||||| ||||| || | || || || || ||||||||||| | || || Sbjct 29008 CTCGTTGTTGCCCAGAATCTGCGAGGTCGACGCCGTGGGCATGGGAGCCATCAGCAGACT 29067 Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACAT------ 65604 ||| || | |||| | | || ||| |||| | ||||||||| ||| | Sbjct 29068 GTTGCGGATACCGTGCTCCTTGATCTTGAGACGGAGGGCGTCCCAGTCCCAGAGACCAGA 29127 Query 65605 CGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTGG 65660 ||| || ||||||| ||||| || |||||| | || || || || Sbjct 29128 CGGCTT------GACATCC------CACATGTCGAACTGCAGGATGCCCTGCGACACGGG 29175 Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTT--GACAGCTGGT 65718 | | | | || | | ||| ||||| || ||| || | ||| | | Sbjct 29176 GCTGCCCTCGTACGA--CGA--GTAGGTGCCCTCAATCTCGGCCAGGTCCGACGAC-GCA 29230 Query 65719 CTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATC 65778 || || ||||| || ||||||||||| || | || || || || ||||| Sbjct 29231 GTC-AGGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCGCGGGCCTCGGG 29289 Query 65779 GCTCTCGTACGGCATACCCAT---CAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAAT 65835 |||| | ||||| | || ||||| | | || |||||||| || || || | Sbjct 29290 CGACTCGAAGGGCATGCGCAGAGCCAGGA---AGGCATCAGCCAGACCCTGGACACCGAC 29346 Query 65836 ACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGAT 65895 ||| ||||| || || |||| ||| | ||||| || || |||||| | |||| Sbjct 29347 ACCAATGGGGCGGTGGCGCATGTTGCTGTTCTTGGCCTCGGGCACGGGGTAGAAGTTGAC 29406 Query 65896 ATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGA 65954 |||||| ||||| |||| ||||| || || || || ||| ||| | | || Sbjct 29407 ATCGATGATGCGGTTCAGGTTGCGGACAACAACCTGGGTGACCTCGT-GCAGCTTCTTGA 29465 Query 65955 AATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAG 66014 | ||| | ||| ||| ||| | | |||||| || ||||| || | Sbjct 29466 AGTCATA--------GACC-TCGTTGGTGTAGT---CGACAAACGACGGCAGGGCCAGCG 29513 Query 66015 ATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA 66074 | || ||||||||||| || | ||| ||||| || | ||||||||||| || ||||||| Sbjct 29514 AAGCCAGGTTGCAGACGGCGACCTCATCAGGGGCCGAGTACTCGACAATCTCCGTGCACA 29573 Query 66075 GATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCT 66134 | || || ||| |||||||||| |||| || || |||||||| ||||| |||| Sbjct 29574 GGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCT 29633 Query 66135 TGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAG 66194 |||||| |||| | || |||||||||| |||| ||| | |||||||| ||| || Sbjct 29634 TGTACAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACAGCT 29693 Query 66195 CGCGTGCCTTCACCGTACGTA--CCGC--CCTACCTTTGCGTTCGTAATGTTCGTAGAGG 66250 | ||||| || || | |||| || |||| ||||| | |||||| || Sbjct 29694 TCTGGGCCTTAACGGTCTTGATGCCGCGGCCCTCCTTC----TCGTACTTTTCGTACAGA 29749 Query 66251 TGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGC 66310 ||||| ||||| | || | ||| | || |||| || || ||||| ||| Sbjct 29750 GCCTCGAACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGC 29809 Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 | ||| || |||| || || ||||| ||| || || ||||| ||||| ||||| | Sbjct 29810 GTCCACTCGCCATTCTTCTCGACACGCTTCATGAACAGGTCAGGAATCCACAGGGCCAGG 29869 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 || |||||||| || || |||||| ||||||| || ||||||| ||||||||||| Sbjct 29870 AACAGATCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGATCGAGGAACTCG 29929 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 |||| |||||| ||||| || || |||||||| ||| | || ||| ||| |||| Sbjct 29930 AAGACGTCGGCGTGCCACGGCTCGAGGTAGATACAGAAGGCACCAGGACGCTTGTTGCCA 29989 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 || ||||| ||||||||||| || ||||| ||||||| ||| || | || ||||| Sbjct 29990 CCCTGGTCAACGTAGCGAGCAGTGTTATTGAACACACGCAGCATGGGGATGATGCCGTTG 30049 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAG 66609 || |||| ||||||||| | ||| || || ||| || || || ||| || || || Sbjct 30050 GACGTGCCGTTGGTGCCGGCAATGTACGAGCC-CGTCGCACGGATGCGGTGGACGTTGAG 30108 Query 66610 ACCAATACCACCGGCCGTCTTCGAG---ATGGCAGCACAATCGGCCACTGTCCGGAATAT 66666 || ||||| ||||||||||| ||| ||||| |||| | |||| | | || Sbjct 30109 GCCGATACCGCCGGCCGTCTTGGAGATCATGGC-GCACGTCTTGAGCGTGTC--GTAGAT 30165 Query 66667 GCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGG 66726 ||| |||||| ||| |||||||| | |||| |||| || || |||| | ||| Sbjct 30166 GCCCTCAATGCTGTCGTCCTTGATGTCGACGAGGAAGCACGAGGACAGCTGGGCCTGGGG 30225 Query 66727 TGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATT 66786 ||| |||| ||| || ||||| | ||||| || ||| | | | |||||||| || Sbjct 30226 CGTGCCGGCGTTGAAAAGCGTGGGCGAGGCGTGGGTGAAGAACTTGTTGGACATGTAGTT 30285 Query 66787 GTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCA 66845 ||| ||||| |||||| |||||||| ||||| || |||| || ||| ||||| | Sbjct 30286 GTAGGTCTCAATGACACGTTCAATGTTATCGCCCCAGATGCCGACAGCGACA-CGCATGA 30344 Query 66846 GGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCA 66905 | || || || || ||||| | | | | || | | | ||||| || || | Sbjct 30345 TCATGTGCTGGGGACGCTCGACGATCTTGCCGTCGAGCTTGAGCAGATAGGAACGCTCGA 30404 Query 66906 GGGTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 ||||||||| |||||||||| ||| ||||| ||| Sbjct 30405 GGGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCG 30439 >seq16 Length=123879 Score = 120 bits (132), Expect = 2e-22 Identities = 207/295 (70%), Gaps = 7/295 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| || Sbjct 3551 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATTGATCTG 3610 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || || | |||||| | || | | |||| | || | | || | Sbjct 3611 TCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGAG-GACGAGCGCTACTTTGTCTC 3669 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | |||| ||||| ||||| || ||||| |||||||| ||||| | | || || Sbjct 3670 GCACATCCTGGCTTTCTTCGCCGCCTCCGACGGCATCGTCAACGAGAACCTCGTCGAGCG 3729 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | ||||| || || | ||||| || || ||||||||||||||||| | Sbjct 3730 CTTCA-GCGGCGAGGTCCAGGTCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 3788 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||||||| ||||||| |||| ||| | |||||||| || ||||||| ||| Sbjct 3789 TGGAGAACATCCACTCCGAGACCTACTCGCTCCTCATCGACACCTACATCAAGGA 3843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565906804480