Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq24 100 1e-15 seq124 93.3 2e-13 >seq24 Length=486131 Score = 100 bits (110), Expect = 1e-15 Identities = 187/267 (70%), Gaps = 12/267 (4%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| ||| ||| ||||||||||||||| ||| |||||||| ||||| ||||| Sbjct 140833 CTCGATCAAATGGGCAATGGTCATGCGCGACGGAATGGCGTGCGGGTTAATGATAATGTC 140774 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGAC 449106 |||||| ||| | | | || |||||||||||| || | | |||| || || Sbjct 140773 GGGCGTGATGCCCTCGACCGTAAACGGCATGTCCTCGTGGCGGTACGCCAGACCAATGGT 140714 Query 449107 GCCCTTCTGGCCGTGGCG-GCTGCAGAACTTGTCCCC---CTGCTCGGGCTTG--CGTGT 449160 ||||| || |||||||| | ||| |||||||| || |||| | |||| |||| Sbjct 140713 ACCCTTTTGACCGTGGCGCGAGGCA-AACTTGTCGCCGATCTGCGGGATCTTGGTCGTGC 140655 Query 449161 GAAGCGCAGCACGATCTTGATGGAGCGGAAGCCGTCCCTGTTGGTGGTGTCGATGACCGA 449220 | | ||| |||| ||||| | |||| ||| ||| |||||| ||| | |||||| Sbjct 140654 GCA-CGC-GCAC---CTTGACGTAGCGCTGGCCCTCCTGGTTGGTCGTGACAATGACCTG 140600 Query 449221 CTCCACGACGGCGTCGTCGGTGCCGCG 449247 ||||| | | ||| || |||| ||| Sbjct 140599 GTCCACAATGCCGTTCTCCGTGCTGCG 140573 >seq124 Length=385807 Score = 93.3 bits (102), Expect = 2e-13 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 349034 AGGTAGACCGACGCATTG--GGCTTCTTCATCTTGGGCGTGGCGTCGAGAATCTCCTTGA 349091 |||||||| | |||| | ||| |||| || ||| | ||| |||||| ||||||| Sbjct 176471 AGGTAGAC--AAGCATAGACGGCGTCTTGATGTTGCTGGCCACGTTGAGAATTTCCTTGA 176528 Query 349092 GTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGA 349151 | | |||| || || || |||||||||| | || ||||| || ||||| || | | Sbjct 176529 GACGCGGCACACCGAGCGTGACGTTCTTGGAAGACACACCGGCGAAATGGAACGTGTTCA 176588 Query 349152 GGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGC 349211 | |||| ||| ||| |||||| || ||| |||| | || || | ||| |||||||||| Sbjct 176589 GCGTCATCTGTGTGGCGGGCTCACCAATGGACTGCGCAGCCAGCACGCCGACCATCTCGC 176648 Query 349212 CGGG 349215 | || Sbjct 176649 CAGG 176652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084727379528736