Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq658 264 2e-68
seq985 170 3e-40
seq446 125 1e-26
>seq658
Length=2797339
Score = 264 bits (292), Expect = 2e-68
Identities = 199/229 (87%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 879122 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 879065
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | ||||||
Sbjct 879064 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 879005
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||||||| |||| ||||| || |||| || | | |||||||| |||||||||
Sbjct 879004 ACCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAACGCGCGTGCA 878947
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 878946 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 878898
Score = 123 bits (136), Expect = 4e-26
Identities = 95/112 (85%), Gaps = 2/112 (2%)
Strand=Plus/Minus
Query 117 ATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
||| |||||||| |||| ||||| || |||| || | | |||||||| |||||||
Sbjct 876790 ATTGNCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAACGCGCGT 876733
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 876732 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 876681
>seq985
Length=1094
Score = 170 bits (188), Expect = 3e-40
Identities = 131/153 (86%), Gaps = 3/153 (2%)
Strand=Plus/Minus
Query 77 AATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGC 135
|||||||||| |||||||||| ||||| | | ||| | |||||||||||||||| ||||
Sbjct 682 AATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATTACCCGGACCTTTCGGA 623
Query 136 CAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAG 195
||||| || |||| || | | |||||||| ||||||||| |||||| |||||||||
Sbjct 622 CAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAACGCGCGTGCAGCCCAGGACATCTAAG 565
Query 196 GGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||
Sbjct 564 GGCATCACAGACCTGTTATTGCCTCAAACTTCC 532
>seq446
Length=775277
Score = 125 bits (138), Expect = 1e-26
Identities = 108/130 (83%), Gaps = 3/130 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| || |||| ||||||| ||||| |||||| ||| |
Sbjct 371098 GTACAAAGGGCAGGGACGTAATCATTGCAAGCT-GATGACTTGCGCTAACTAGGGATTAC 371156
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
|||||||||| ||| |||||||||| |||||||||| | | ||| | ||| | |||| |
Sbjct 371157 -TCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCGCAATGGAGTTTAACAAGACT 371215
Query 120 ACCCGGACCT 129
||||||| ||
Sbjct 371216 ACCCGGAGCT 371225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751989553310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |