Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq658 264 2e-68 seq985 170 3e-40 seq446 125 1e-26 >seq658 Length=2797339 Score = 264 bits (292), Expect = 2e-68 Identities = 199/229 (87%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 879122 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 879065 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 879064 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 879005 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||||| |||| ||||| || |||| || | | |||||||| ||||||||| Sbjct 879004 ACCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAACGCGCGTGCA 878947 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 878946 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 878898 Score = 123 bits (136), Expect = 4e-26 Identities = 95/112 (85%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 117 ATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176 ||| |||||||| |||| ||||| || |||| || | | |||||||| ||||||| Sbjct 876790 ATTGNCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAACGCGCGT 876733 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 || |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 876732 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 876681 >seq985 Length=1094 Score = 170 bits (188), Expect = 3e-40 Identities = 131/153 (86%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 77 AATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGC 135 |||||||||| |||||||||| ||||| | | ||| | |||||||||||||||| |||| Sbjct 682 AATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATTACCCGGACCTTTCGGA 623 Query 136 CAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAG 195 ||||| || |||| || | | |||||||| ||||||||| |||||| ||||||||| Sbjct 622 CAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAACGCGCGTGCAGCCCAGGACATCTAAG 565 Query 196 GGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||| Sbjct 564 GGCATCACAGACCTGTTATTGCCTCAAACTTCC 532 >seq446 Length=775277 Score = 125 bits (138), Expect = 1e-26 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| || |||| ||||||| ||||| |||||| ||| | Sbjct 371098 GTACAAAGGGCAGGGACGTAATCATTGCAAGCT-GATGACTTGCGCTAACTAGGGATTAC 371156 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||| ||| |||||||||| |||||||||| | | ||| | ||| | |||| | Sbjct 371157 -TCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCGCAATGGAGTTTAACAAGACT 371215 Query 120 ACCCGGACCT 129 ||||||| || Sbjct 371216 ACCCGGAGCT 371225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751989553310