Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1369 104 7e-20 seq901 75.2 3e-11 >seq1369 Length=37551 Score = 104 bits (114), Expect = 7e-20 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| || | ||| | ||||||| | |||||| ||| | Sbjct 13303 GGGGACAAAGACAAGTCATCATGGCCTTGATGTTATGGGCTATAGACGTGCCACATGTGC 13362 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 | | |||||| | || ||| || ||| | |||| |||| | ||| | | | | | | Sbjct 13363 CTAAACAAAGAGATGCAAAAACGTGAGTTTAAGCTAATCTCTCAAAATAGGATATAAATA 13422 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||||||||||| || ||||||||||||| | ||| ||||||||||| ||| Sbjct 13423 TTAAGGATTGTAGTCTGAAATTCGACTATATGAATAGGTAATTACTAGTAATCGTGAATC 13482 Query 471 AGCATGCTACGGTGAATA 488 | |||| |||||||||| Sbjct 13483 ACCATGTCACGGTGAATA 13500 >seq901 Length=2163 Score = 75.2 bits (82), Expect = 3e-11 Identities = 61/74 (82%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||||||||||| || ||||||||||||| | ||| ||||||||||| |||| || Sbjct 216 GGATTGTAGTCTGAAATTCGACTATATGAATAGGTAATTACTAGTAATCGTGAATCACCA 157 Query 475 TGCTACGGTGAATA 488 || |||||||||| Sbjct 156 TGTCACGGTGAATA 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503978432640