Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq658 428 9e-118
seq985 286 7e-75
seq446 159 7e-37
>seq658
Length=2797339
Score = 428 bits (474), Expect = 9e-118
Identities = 281/309 (91%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||||||||||||||
Sbjct 878815 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 878874
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 878875 AGGGACTATCGGCGCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 878934
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||| |||||| ||||||||| ||||||||| |||||| ||||| | | ||||| |||
Sbjct 878935 GATGTCCTGGGCTGCACGCGCGTTACACTGACGGAGCCAGCGAGTACTT--CCTTGTCCG 878992
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 878993 AAAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 879052
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 879053 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 879112
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 879113 CCCTTTGTA 879121
Score = 237 bits (262), Expect = 3e-60
Identities = 170/195 (87%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||||||||||||||
Sbjct 876598 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 876657
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 876658 AGGGACTATCGGCGAAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 876717
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||| |||||| ||||||||| ||||||||| |||||| ||||| | | ||||| |||
Sbjct 876718 GATGTCCTGGGCTGCACGCGCGTTACACTGACGGAGCCAGCGAGTACTT--CCTTGTCCG 876775
Query 200 GAAGGTCTGGGTAAT 214
|||||| || |||
Sbjct 876776 AAAGGTCCGGNCAAT 876790
>seq985
Length=1094
Score = 286 bits (316), Expect = 7e-75
Identities = 193/216 (89%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 40 AAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGCC 99
|||||||| | |||||||| | |||||||||||||||||||||| |||| ||||||
Sbjct 469 AAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAGAGGGACTAYCGGCGCAAGCC 528
Query 100 GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCG 159
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 529 GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCG 588
Query 160 CGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGT 219
|| ||||||||| |||||| ||||| | | ||||| ||| |||||| ||||||||||||
Sbjct 589 CGTTACACTGACGGAGCCAGCGAGTACTT--CCTTGTCCGAAAGGTCCGGGTAATCTTGT 646
Query 220 TAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255
||||||| ||||||||||||||||||||||||||||
Sbjct 647 TAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATT 682
Score = 145 bits (160), Expect = 1e-32
Identities = 96/107 (90%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||||||||||||||
Sbjct 361 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTMCGCCGGCTTCTTAG 420
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126
|||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 421 AGGGACTAYCGGCGCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 467
>seq446
Length=775277
Score = 159 bits (176), Expect = 7e-37
Identities = 112/128 (88%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260
||| || ||||| ||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct 371226 AAGCTCCGGGTAGTCTTGTTAAACTCCATTGCGCTGGGGATAGAGCATTGCAATTATTGC 371167
Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320
||||||||||| ||| |||||| ||||| ||||||||| || |||||||||||||||
Sbjct 371166 TCTTCAACGAGTAATCCCTAGTTAGCGCAAGTCATCAGCTTGCAATGATTACGTCCCTGC 371107
Query 321 CCTTTGTA 328
||||||||
Sbjct 371106 CCTTTGTA 371099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947186417152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |