Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq658 428 9e-118 seq985 286 7e-75 seq446 159 7e-37 >seq658 Length=2797339 Score = 428 bits (474), Expect = 9e-118 Identities = 281/309 (91%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | |||||||||||||| Sbjct 878815 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 878874 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 878875 AGGGACTATCGGCGCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 878934 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||| |||||| ||||||||| ||||||||| |||||| ||||| | | ||||| ||| Sbjct 878935 GATGTCCTGGGCTGCACGCGCGTTACACTGACGGAGCCAGCGAGTACTT--CCTTGTCCG 878992 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 878993 AAAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 879052 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 879053 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 879112 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 879113 CCCTTTGTA 879121 Score = 237 bits (262), Expect = 3e-60 Identities = 170/195 (87%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | |||||||||||||| Sbjct 876598 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 876657 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 876658 AGGGACTATCGGCGAAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 876717 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||| |||||| ||||||||| ||||||||| |||||| ||||| | | ||||| ||| Sbjct 876718 GATGTCCTGGGCTGCACGCGCGTTACACTGACGGAGCCAGCGAGTACTT--CCTTGTCCG 876775 Query 200 GAAGGTCTGGGTAAT 214 |||||| || ||| Sbjct 876776 AAAGGTCCGGNCAAT 876790 >seq985 Length=1094 Score = 286 bits (316), Expect = 7e-75 Identities = 193/216 (89%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40 AAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGCC 99 |||||||| | |||||||| | |||||||||||||||||||||| |||| |||||| Sbjct 469 AAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAGAGGGACTAYCGGCGCAAGCC 528 Query 100 GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCG 159 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct 529 GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCG 588 Query 160 CGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGT 219 || ||||||||| |||||| ||||| | | ||||| ||| |||||| |||||||||||| Sbjct 589 CGTTACACTGACGGAGCCAGCGAGTACTT--CCTTGTCCGAAAGGTCCGGGTAATCTTGT 646 Query 220 TAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 ||||||| |||||||||||||||||||||||||||| Sbjct 647 TAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATT 682 Score = 145 bits (160), Expect = 1e-32 Identities = 96/107 (90%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | |||||||||||||| Sbjct 361 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTMCGCCGGCTTCTTAG 420 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 |||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 421 AGGGACTAYCGGCGCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 467 >seq446 Length=775277 Score = 159 bits (176), Expect = 7e-37 Identities = 112/128 (88%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260 ||| || ||||| ||||||||||||| | | |||||||||||||||||||||||||||| Sbjct 371226 AAGCTCCGGGTAGTCTTGTTAAACTCCATTGCGCTGGGGATAGAGCATTGCAATTATTGC 371167 Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320 ||||||||||| ||| |||||| ||||| ||||||||| || ||||||||||||||| Sbjct 371166 TCTTCAACGAGTAATCCCTAGTTAGCGCAAGTCATCAGCTTGCAATGATTACGTCCCTGC 371107 Query 321 CCTTTGTA 328 |||||||| Sbjct 371106 CCTTTGTA 371099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947186417152