Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq658 731 0.0
seq985 210 7e-52
>seq658
Length=2797339
Score = 731 bits (810), Expect = 0.0
Identities = 466/504 (92%), Gaps = 2/504 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 878010 GTACTCATTCCGATTACAAGACCCGAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 877951
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 877950 CCCCGAGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 877891
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 877890 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 877831
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||| || | |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 877830 GGCCACTACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAGCCATCGCCGGCG 877771
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||| |||||||||| ||||||| |||| |||||||||||||| | |||||||||||
Sbjct 877770 CAAGGCCGTGCGATTCGTGAAGTTATCATGATTCACCAAGGAGCCCAG-AGGGCGTTGGT 877712
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| ||||||||||||| |||||||||||||| ||| || |||||||||||||||||||
Sbjct 877711 TTTTAATCTAATAAATACGCCCCTTCCGAAGTCAGGGCTTGTAGCATGTATTAGCTCTAG 877652
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||
Sbjct 877651 AATTACCACGGTTATCCAAGTAGTAAGGCACTATCAAATAAACGATAACTTATATAATGA 877592
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 877591 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 877533
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 877532 AGACAAGCATATGACTACTGGCAG 877509
>seq985
Length=1094
Score = 210 bits (232), Expect = 7e-52
Identities = 136/148 (92%), Gaps = 1/148 (1%)
Strand=Plus/Plus
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||| |||||||||| ||||||| |||| |||||||||||||| || ||||||||||
Sbjct 947 CAAGGCCGTGCGATTCGTGAAGTTATCATGATTCACCAAGGAGCCCAGA-GGGCGTTGGT 1005
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| ||||||||||||| |||||||||||||| ||| || |||||||||||||||||||
Sbjct 1006 TTTTAATCTAATAAATACGCCCCTTCCGAAGTCAGGGCTTGTAGCATGTATTAGCTCTAG 1065
Query 361 AATTACCACGGTTATCCATGTAGTAAGG 388
|||||||||||||||||| |||||||||
Sbjct 1066 AATTACCACGGTTATCCAAGTAGTAAGG 1093
Score = 80.6 bits (88), Expect = 8e-13
Identities = 57/64 (89%), Gaps = 1/64 (2%)
Strand=Plus/Minus
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|| |||| |||||||||| ||||||| |||| |||||||||||||| | |||||||||||
Sbjct 956 CACGGCCTTGCGATTCGTGAAGTTATCATGATTCACCAAGGAGCCCAG-AGGGCGTTGGT 898
Query 301 TTTT 304
||||
Sbjct 897 TTTT 894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510378340864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |