Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq117 91.5 4e-16 >seq117 Length=3748 Score = 91.5 bits (100), Expect = 4e-16 Identities = 271/414 (65%), Gaps = 17/414 (4%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||| || ||| || |||||||||| | | |||||||| |||||| | Sbjct 1538 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGCATCGTGAG 1597 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||||| ||| | | | ||| | ||||| ||||||||||||||||||| | || Sbjct 1598 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTCATA 1657 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC---GTTAG----CTAACC 187 | || ||||||| || | |||| ||| |||| | || | |||| |||| Sbjct 1658 GGTAAGGCCGCCATTAAATGGGGGTTCCTTCAAAACCTAGCCTATTTTAGTCGTCTAAGT 1717 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 ||| |||||| || || |||||| | ||| |||||| | | || | | || Sbjct 1718 AAATCCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACATTGATTTACATCTT 1777 Query 248 -TGCAGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCTGGTATCTTCGACCGGCA 304 ||| ||||||||||||| | ||||||||| ||| | | | ||| | | | Sbjct 1778 ACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCTCCTCTTCC 1837 Query 305 TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364 | | || | | || ||| | ||| ||||||||||| |||||||||| Sbjct 1838 TAAACTGA--TATTAA-----TCAGTAGGAATGGCACACCTTCTCCCTCAGTTACGGTGT 1890 Query 365 CTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 | |||||| |||||||| ||| ||||| |||||| ||||||||||| Sbjct 1891 CAATTTGCCGAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 1944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260794780288