Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq117 82.4 2e-13 >seq117 Length=3748 Score = 82.4 bits (90), Expect = 2e-13 Identities = 259/391 (66%), Gaps = 48/391 (12%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64 |||||||| | ||| || |||||| ||| | || ||||||||| ||| |||| Sbjct 1538 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGC----ATCG 1593 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 | | | ||| |||| | | | ||| | ||||| ||||||||||||||||||| | Sbjct 1594 TGAGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 1653 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT-GC---TTCGATTGCTC 176 |||| || ||||||| || | ||||| || |||| || || || | | || Sbjct 1654 CATAGGTAAGGCCGCCATTAAATGGGGGTT-CCTTCAAAACCTAGCCTATTTTAGTCGTC 1712 Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCT 233 ||| | || |||||| ||| || |||||| ||| || || |||||||| | | Sbjct 1713 TAAGTAAATCCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACATTGATT 1769 Query 234 TGCGACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCC-------TAT-T 284 | | |||| ||| | ||||||||| |||||||||| || | ||| | Sbjct 1770 TACATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCG--TGCAACACCATTTTATGT 1827 Query 285 CTCTGCGGCCT---GTCATA-----------GACAGGCACCCCTTCTCCCTAAGTTACGG 330 ||| | ||| | ||| || ||||| |||||||||| |||||||| Sbjct 1828 CTCCTCTTCCTAAACTGATATTAATCAGTAGGAATGGCACACCTTCTCCCTCAGTTACGG 1887 Query 331 GGTCATTTTGCCGAGTTCCTTAACAATAGTT 361 |||| ||||||||||||||||| || ||| Sbjct 1888 TGTCAATTTGCCGAGTTCCTTAATGATTGTT 1918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062395601664