Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq391 174 5e-41 seq213 131 5e-28 seq356 127 6e-27 >seq391 Length=4764 Score = 174 bits (192), Expect = 5e-41 Identities = 185/243 (76%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 208 TAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATT 267 ||||||||||||| ||| ||| || || || ||||| || || || || | | Sbjct 1581 TAGGGCAGAAATTCAAATAAACTATTGCTAGCGTAAGGCTATATAATCTGTAAAAATTTA 1522 Query 268 ATGAATC-ACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTC 326 | || | ||| | |||| |||||| || | ||| |||||||||||| | |||||| Sbjct 1521 AATAAACTACCTAAAAGCCTTAAAGGGCATTAGGCTTTCATCTAATAAATATATCCCTTC 1462 Query 327 CGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA 386 |||| ||||||||||||| |||||||||||||||||| |||| |||| | | |||| Sbjct 1461 TAAAGTTAGGGTTTTTAGCATATATTAGCTCTAGAATTACTACGGATATCTAAGCGGTAA 1402 Query 387 GGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT 446 |||| ||| ||||||| ||||||||||| |||||| ||||||||||| || ||||| | Sbjct 1401 GGTATTATTAAATAAATAATAACTGATTTTATGAGCTATTCGCAGTTTTACGGTATAATT 1342 Query 447 TGC 449 ||| Sbjct 1341 TGC 1339 >seq213 Length=6163 Score = 131 bits (144), Expect = 5e-28 Identities = 105/127 (83%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 323 CTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA 382 |||| |||| ||||||| ||||| |||||||||||||||||| | || |||| | | Sbjct 5161 CTTCTAAAGTTAGGGTTTTCAGCATATATTAGCTCTAGAATTACTATGGATATCTAAGCG 5220 Query 383 GTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT 442 |||||||| ||| ||||||| ||||||||||| |||||| |||||||||||||| |||| Sbjct 5221 GTAAGGTATTATTAAATAAATAATAACTGATTTCATGAGCTATTCGCAGTTTCACGGTAT 5280 Query 443 AGATTGC 449 | |||| Sbjct 5281 AATTTGC 5287 >seq356 Length=65623 Score = 127 bits (140), Expect = 6e-27 Identities = 105/128 (82%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 322 CCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT 381 ||||| |||| ||||||||||||| |||||||||||||||||| | || |||| | | Sbjct 64317 CCTTCTAAAGTTAGGGTTTTTAGCATATATTAGCTCTAGAATTACTATGGATATCTAAGC 64376 Query 382 AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 |||||||| ||| ||||||| |||||| |||| || ||| |||||||||||||| ||| Sbjct 64377 GGTAAGGTATTATTAAATAAATAATAACTAATTTTATAAGCTATTCGCAGTTTCACGGTA 64436 Query 442 TAGATTGC 449 || |||| Sbjct 64437 TAATTTGC 64444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510393746944