Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq393 444 5e-120 seq403 116 3e-21 >seq393 Length=255347 Score = 444 bits (492), Expect = 5e-120 Identities = 1224/1850 (66%), Gaps = 48/1850 (3%) Strand=Plus/Minus Query 65105 GCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAA 65164 || ||| |||| | || ||||||||||| ||||| || ||| ||| || || Sbjct 193182 GCGGCCATGGTACGGAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCATCCAGCAAAG 193123 Query 65165 TGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCACATGCATATTCAACGACTGACT 65223 |||||||| | | || |||| | | ||||| || || || ||||||||||| Sbjct 193122 TGCATCGACG-TGATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTCAACGACTGGGA 193064 Query 65224 CTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATCTC 65283 ||| ||||| | |||||| || |||||||| || ||||| | || ||| || || Sbjct 193063 CTGGTCGATAAAGGCACCACGGTCGGCAGCCATCTCGATGATTCTGCGCTGCGAGATTTC 193004 Query 65284 CCAGACGGTCTTGTACAGGCGACGTAC-CTCAATTGGAATCTCCTCAATGTCCTGGACTG 65342 ||| || |||||||| || | | | |||| || || | ||| || || | || Sbjct 193003 CCAAACAGTCTTGTAAAG-CTCCTTGGTCTCATCGGGGATATTGGGAAT-TCGTGCAATG 192946 Query 65343 -AACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATA 65401 |||||| || || ||||| || ||| ||| ||||||| |||| |||| | Sbjct 192945 GAACCACCCTCGGCGATGATGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACA 192886 Query 65402 AGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACTCGCCGGACAGTACACGACGGA 65459 || | |||| | || | | |||| || |||||||| || | || ||||| || Sbjct 192885 AGGTCCTTGAGC--AGCCATGGGTTGACCACCTGGAACTCACCAGCGAGCACACGGCGAG 192828 Query 65460 CATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAG 65519 || |||||||| ||| || || ||| | || |||| || ||||| || | || | Sbjct 192827 AGTAAATGTTGGAAGTGTATGGCTCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGG 192768 Query 65520 ATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTG- 65578 | |||||||||||||| |||| | || ||||| || | |||| | |||| ||| Sbjct 192767 AGGCAGTTGGCATGGGTGCGATGAGCAGCGAGTTGCGGACACCGTGCTGGGCAATCTTGG 192708 Query 65579 ---TGACGCAATTCGTCCCAGTTCCACA--TCGGTTTATCGTCGACATCCACGGGCCACA 65633 ||| || || ||||||| ||| | ||||| ||| | ||| |||| Sbjct 192707 CCTTGA-GC---TCATCCCAGTCCCAGAGATCGGTAGGG-GTCTTC-TCC------CACA 192660 Query 65634 TATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCT 65693 | || | || || | || | | | || || || | | | ||||| || Sbjct 192659 TGTCGTACTGGAGAATGCCCTTGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGGACCAA 192600 Query 65694 CCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGC 65753 |||||||||| | ||| | || ||||| || ||||||||||| || Sbjct 192599 GTTCCTTGGCAATATCGCAGGACGAAGTCAGAGCGGCGTGGTAGATGGTCTCGAAGATCT 192540 Query 65754 GTCGATTAAG-TTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTG 65812 | || || ||| | |||| | | |||| | |||| | || || |||| Sbjct 192539 GAATGTTGAGCTTCTTG-GCCTGGTTGGACTCGAAGGGCAGGCGCAGGGCGAGGAAAGCA 192481 Query 65813 TCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCC 65872 ||||||||||| || || || ||||| || || || || || || ||| || | |||| Sbjct 192480 TCGGCCAGACCCTGTACACCCATACCAATAGGTCGGTGGCGGAAGTTGCTGCGGCGCGCC 192421 Query 65873 TCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGC 65932 || || ||||||| |||| || ||||| ||||| ||||| || || || || Sbjct 192420 TCCTCAACGGGGTAGTGGTTGACCTCAATAATCTTGTTCAAGTTGCGGGTGACGACTTGG 192361 Query 65933 ACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACA 65990 | || ||| || | || || ||||| | | || || || | Sbjct 192360 --GTAACCTCGTGCAGCTTTTGAAAGTCAAACTC-----GCCG--CGCTTGT-----AGT 192315 Query 65991 CCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGG 66050 | ||||| || || || || || || |||||||||||||| | ||| |||||||| | Sbjct 192314 CGACAAATGAAGGCAGAGCGAGCGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGCAG 192255 Query 66051 TATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGAT 66110 | ||||||||||| |||||||| || || || ||| |||||||||| |||| || | Sbjct 192254 TGTACTCGACAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGT 192195 Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170 | |||||||| ||||| ||||||||||| | ||| | || | || |||||| || | Sbjct 192194 TGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGAG 192135 Query 66171 ACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGC 66230 ||||| ||| || | ||| || | || ||||| | | ||||| ||||| Sbjct 192134 CCTCAAGGATAGCATACCACAGCTTCTGGGCGCGAACCGT-CTCGCGGCCCTTGTTTTGC 192076 Query 66231 GT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289 | ||||| ||||| || |||||| || || | || |||| |||| || Sbjct 192075 TTCTCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACCAGGG 192016 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349 |||| || || |||||||| | |||||| || | || || ||||| ||| || | Sbjct 192015 CACTCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTTGGACACGCTTCATGAACAAG 191956 Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTT 66409 || || ||||| || ||||||||||||||||| || || |||||| | ||||| || Sbjct 191955 TCGGGAATCCACAGAGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTTCCGTGGTTC 191896 Query 66410 TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAAC 66469 ||||||| ||| ||||| |||||| || || |||||||| || ||||||||||| || Sbjct 191895 TTGCGCAGGTCCAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAG 191836 Query 66470 GAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGC 66529 | || || ||| |||||| |||||||||||||||||| |||||| | ||||| Sbjct 191835 GCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACGG 191776 Query 66530 AACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC 66589 | ||| || | ||| ||||| ||| | || ||||||||| | ||| ||| || || Sbjct 191775 AGCATGGGAATGAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTAGGAGCCGGTGGCA 191716 Query 66590 CGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCG 66649 || || ||| || || ||||||||||| || || ||||| ||||| ||| ||| Sbjct 191715 CGGATTCGGTGGACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTC 191656 Query 66650 GCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAA 66709 | ||| | | |||||||| ||| ||| |||| ||| | |||| |||| || Sbjct 191655 TTGAGTGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAG 191596 Query 66710 CTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAA 66769 | |||||| |||||| | || ||| ||||| || | ||||| |||||||| Sbjct 191595 GACATCTGGGGTGATGGTGTGCCTGCGTTGAACAGGGTTGGCGAGGCGTGTGTAAAGTAC 191536 Query 66770 TGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCG 66829 | | |||||||| | ||| ||||| ||| | ||||||| ||||| || || ||| Sbjct 191535 TTTTGCGACATGTAGTCGTAAGTCTCAATGGCCTTTTCAATGTCATCGCCGTGTATGCCG 191476 Query 66830 AGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATT 66889 | ||| |||||| || | || ||| || || ||| | | | | || | | | | Sbjct 191475 ACGGCAACTCGCATGAGCATGTGTTGTGGGCGCTCGGCAACCTTGCCATTTACACGGAGG 191416 Query 66890 AAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | |||||| || || || ||||||| || ||| || ||| ||||| || Sbjct 191415 AGGTAGGACCGCTCGAGCGTCTTGAAGCCGAAGAACTGGTAGTTGAAGTC 191366 >seq403 Length=285126 Score = 116 bits (128), Expect = 3e-21 Identities = 291/439 (66%), Gaps = 11/439 (3%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | || ||||| || || || ||| | ||||| |||||| Sbjct 107832 GCGTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTTCATTCGCCTCCATCTTCTGGTTG 107773 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||||||||| |||||| ||| ||| | || || || |||||| Sbjct 107772 AAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 107713 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 || ||||| || ||||| |||| || || ||| | || | ||| | Sbjct 107712 GGTATGCACACCGACTTTGCCTGCCTGCTCTT------CTCTCTCCTCAA-CAACCGCCC 107660 Query 61678 GAGGA--GC--GTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCT 61733 || | || ||| | | || | || || || || || ||||| || || Sbjct 107659 CAGCAAGGCTGCTGTCGAGGCTATCATCACCGAAGCTGTCGAGATTGAGCAGGAGTTCCT 107600 Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793 | ||||| | || | | || |||||||||| || |||| ||||| || Sbjct 107599 CAGCGACGCGCTTCCTTGCGCTCTTCTCGGCATGAACGCCACTCTCATGTGCCAGTACAT 107540 Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853 ||| || || |||||||||||| | | | | | || | | ||| || | | Sbjct 107539 TGAGTTCGTCGCCGACCGTCTGCTCCTTGCTCTCGGCAACCCCAAGTACTACAACGCCAC 107480 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||| || || |||||||| | || ||||| | ||||||||| || || |||||||| Sbjct 107479 CAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAA 107420 Query 61914 ACGTGTAGGCGACTATCAA 61932 ||||| || ||||| ||| Sbjct 107419 GCGTGTTGGTGACTACCAA 107401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565994020960