Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq57 158 1e-33
seq2 147 2e-30
seq3 102 6e-17
seq82 98.7 8e-16
>seq57
Length=16334
Score = 158 bits (174), Expect = 1e-33
Identities = 398/602 (66%), Gaps = 4/602 (1%)
Strand=Plus/Minus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
||| || | ||| || |||| || ||| ||| || || || || || || || |
Sbjct 16283 CATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCGAACTTCTTCTTT 16224
Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459
|||||| || || || | |||||| ||||| || | || |||||||| || || || ||
Sbjct 16223 GCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATGCCAAGGCTCAAGATA 16164
Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519
||| || || | || ||| ||| |||||||||||||||||| | ||| ||||||
Sbjct 16163 GATAGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACGTATCTGGCGGTATTGTT 16104
Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579
||| || || | |||||| |||| ||||| || ||||| || || |||| ||
Sbjct 16103 GAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGTTCCTGAGATGTATGA 16044
Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639
||| || || || ||| | || |||||||||||||| || ||||| |||||
Sbjct 16043 ACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAATACCACCAGCGGTCTTGGAGATCAT 15984
Query 66640 AGCACAA-TCGGCCA-CTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGG 66697
|||||| || | | |||| | | || || |||||| ||| |||| ||| | |
Sbjct 15983 GGCACAAGTCTTCAAGGTGTC--GTASATACCTTCAATGCTGTCTTCCTTCATGTCGATG 15926
Query 66698 AGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCG 66757
||| |||| || ||| || | || || || | || ||| || ||||||| ||
Sbjct 15925 AGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCATTGAAAAGAGTGGGTGAGGCA 15866
Query 66758 TGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCG 66817
|| || || | | ||||| | || || || ||||| | | | || | |||
Sbjct 15865 TGAGTGAAATGCCTGTTGGACATCAAGTTATATGTTTCGATTGCCCCTTGGATATCTTCA 15806
Query 66818 CCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC 66877
|| || ||| | | ||| ||||| | | || || || ||||| || | | | |
Sbjct 15805 CCGTGGATCTCCACTGCCACCCGCATGATCATGTGCTGTGGGCGTTCAACAACCTGCTTA 15746
Query 66878 TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAA 66937
| ||| | | ||||| || || || || ||||||| |||||||| ||| |||||
Sbjct 15745 TCCATACGAAGCAAGTACGAACGCTCAAGAGTCTTGAACCCAAAGTATTGGTAGTTGAAG 15686
Query 66938 TC 66939
||
Sbjct 15685 TC 15684
>seq2
Length=1065396
Score = 147 bits (162), Expect = 2e-30
Identities = 213/295 (72%), Gaps = 7/295 (2%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| ||||| || ||||| || || ||||| ||||| | || ||| ||||| |
Sbjct 669520 ATATGGCAGATGTATAAGAAGGCCGAGGCATCCTTTTGGACTGCTGAAGAGATCGATCTT 669461
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
||||||||| | | |||||| | ||| | | ||| | ||||| | |||||
Sbjct 669460 TCCAAAGACCTCCACGACTGGAATAACCGTCTCAACGAT-GATGAACGCTACTTCATATC 669402
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
||||| | || ||||| || ||||| ||||| ||||| || |||||| | | ||| |
Sbjct 669401 TCATGTCCTTGCCTTCTTCGCTGCTTCTGACGGCATCGTGAACGAGAATCTTGTCGAAAG 669342
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| ||| || |||| || | | |||||||| ||||||||||| ||||||||| |
Sbjct 669341 ATTCAGCGGAG-AGGTTCAGATTCCTGAGGCGCGCTGTTTCTACGGGTTCCAGATTATGA 669283
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
||||||| |||| || |||| ||| ||||||| ||||| ||||||| |||
Sbjct 669282 TGGAGAACATCCATTCTGAGACCTACTCGCTTCTCATTGATACCTACATCAAGGA 669228
>seq3
Length=917765
Score = 102 bits (112), Expect = 6e-17
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 9147 TTGGGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCAT 9206
|||||||| | ||||| || |||||||| ||||| || || |||||| ||| |||
Sbjct 193986 TTGGGCCCTGTCTACGGCTTTCAGTGGCGCCATTTTGGCGCCGAGTACATAGATGCGCAT 194045
Query 9207 ACGGACTATACGGGCCAAGGTGTGGATCAGTTGGCGCAATGTATGCATCAGATCCAATAT 9266
| |||||||| || ||||| ||||||||||||||| || || | || | | ||
Sbjct 194046 GCAGACTATACAGGTCAAGGAGTGGATCAGTTGGCGGAAGTGATCGACAAGCTTAAGAAT 194105
Query 9267 GAGCCGAGTAGTCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGATG 9326
|||| ||| || || || ||| ||||||||||| ||| ||| | ||||||
Sbjct 194106 AAGCCATACGATCGGCGTATCATCTTGAGCGCCTGGAATCCAGCCGACTTGAAGAAGATG 194165
Query 9327 GTATTGCCGCCATGCCATATG 9347
| ||||||| ||||| |||
Sbjct 194166 GCGCTGCCGCCTTGCCACATG 194186
>seq82
Length=10320
Score = 98.7 bits (108), Expect = 8e-16
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073
|| || |||||||| ||||| | ||| || || || || || ||||| ||||| |||||
Sbjct 350 GAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACGATTTCCGTGCAG 291
Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133
||||| || || || || || | ||| | || || |||||||| ||||| ||||||
Sbjct 290 AGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 231
Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTC 66162
||||| | |||| | || | ||||||||
Sbjct 230 TTGTAAAGCATGAAGGGGTTTCCGGTCTC 202
Score = 84.2 bits (92), Expect = 2e-11
Identities = 274/414 (66%), Gaps = 19/414 (5%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
||||||||| || || || | | | || ||| |||| | || ||||||||||| ||
Sbjct 1269 ATCGACCGTAAATTGAATAGGCTGACTGGCTGCCATGGTGCGTAGGTAGTACATGCCCGT 1210
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
||| || ||| ||| || ||| ||||| | | | || |||| | | || |
Sbjct 1209 CTTAAGACCAAGCTTCCACCCAGCGAAGTGCAT-GCTCGTGATCTTGCCCATGGTGGGTT 1151
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGCC 65254
| || || || || | || ||| |||||| ||| |||| |||||||| || |||
Sbjct 1150 CTTTCATGTGAATGTTGAGAGATTGAGACTGATCAATG-AACGCGCCACGATCAGCGGCC 1092
Query 65255 ATGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-AC 65310
|| | ||||| | || | || || |||||||| |||||||| || || | | |
Sbjct 1091 ATCTGAACAATGGTGCGCTGA---GAGATTTCCCAGACAGTCTTGTAGAG-CGCCTTGAG 1036
Query 65311 CTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACG 65370
|| || || | ||||| |||| |||||||| | ||||| || || ||
Sbjct 1035 GTCGGCAGGGATATTGGGAATGTTTTGGATTGAACCACCATCGGCAATGATACGGTTCTT 976
Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATGTT---GAACCAAGTGACGATTGAT 65427
||| |||||||| | ||||| || | ||||| | ||| | || | ||||
Sbjct 975 CATGTTATCTGACCATAGACCCATGTCAACAAGATCCTTCAGAAGCCAGGGG---TTGAC 919
Query 65428 GACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTG-ATGG 65480
|||||||||||| |||| || ||||| || ||||||||||| ||| ||||
Sbjct 918 GACTTGGAACTCTCCGGCAAGGACACGGCGAGAGTAGATGTTGGATGTGTATGG 865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567181134160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |