Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq57 158 1e-33 seq2 147 2e-30 seq3 102 6e-17 seq82 98.7 8e-16 >seq57 Length=16334 Score = 158 bits (174), Expect = 1e-33 Identities = 398/602 (66%), Gaps = 4/602 (1%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || | ||| || |||| || ||| ||| || || || || || || || | Sbjct 16283 CATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCGAACTTCTTCTTT 16224 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 |||||| || || || | |||||| ||||| || | || |||||||| || || || || Sbjct 16223 GCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATGCCAAGGCTCAAGATA 16164 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 ||| || || | || ||| ||| |||||||||||||||||| | ||| |||||| Sbjct 16163 GATAGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACGTATCTGGCGGTATTGTT 16104 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579 ||| || || | |||||| |||| ||||| || ||||| || || |||| || Sbjct 16103 GAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGTTCCTGAGATGTATGA 16044 Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639 ||| || || || ||| | || |||||||||||||| || ||||| ||||| Sbjct 16043 ACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAATACCACCAGCGGTCTTGGAGATCAT 15984 Query 66640 AGCACAA-TCGGCCA-CTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGG 66697 |||||| || | | |||| | | || || |||||| ||| |||| ||| | | Sbjct 15983 GGCACAAGTCTTCAAGGTGTC--GTASATACCTTCAATGCTGTCTTCCTTCATGTCGATG 15926 Query 66698 AGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCG 66757 ||| |||| || ||| || | || || || | || ||| || ||||||| || Sbjct 15925 AGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCATTGAAAAGAGTGGGTGAGGCA 15866 Query 66758 TGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCG 66817 || || || | | ||||| | || || || ||||| | | | || | ||| Sbjct 15865 TGAGTGAAATGCCTGTTGGACATCAAGTTATATGTTTCGATTGCCCCTTGGATATCTTCA 15806 Query 66818 CCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC 66877 || || ||| | | ||| ||||| | | || || || ||||| || | | | | Sbjct 15805 CCGTGGATCTCCACTGCCACCCGCATGATCATGTGCTGTGGGCGTTCAACAACCTGCTTA 15746 Query 66878 TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAA 66937 | ||| | | ||||| || || || || ||||||| |||||||| ||| ||||| Sbjct 15745 TCCATACGAAGCAAGTACGAACGCTCAAGAGTCTTGAACCCAAAGTATTGGTAGTTGAAG 15686 Query 66938 TC 66939 || Sbjct 15685 TC 15684 >seq2 Length=1065396 Score = 147 bits (162), Expect = 2e-30 Identities = 213/295 (72%), Gaps = 7/295 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| ||||| || ||||| || || ||||| ||||| | || ||| ||||| | Sbjct 669520 ATATGGCAGATGTATAAGAAGGCCGAGGCATCCTTTTGGACTGCTGAAGAGATCGATCTT 669461 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||||||| | | |||||| | ||| | | ||| | ||||| | ||||| Sbjct 669460 TCCAAAGACCTCCACGACTGGAATAACCGTCTCAACGAT-GATGAACGCTACTTCATATC 669402 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| | || ||||| || ||||| ||||| ||||| || |||||| | | ||| | Sbjct 669401 TCATGTCCTTGCCTTCTTCGCTGCTTCTGACGGCATCGTGAACGAGAATCTTGTCGAAAG 669342 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| ||| || |||| || | | |||||||| ||||||||||| ||||||||| | Sbjct 669341 ATTCAGCGGAG-AGGTTCAGATTCCTGAGGCGCGCTGTTTCTACGGGTTCCAGATTATGA 669283 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||||||| |||| || |||| ||| ||||||| ||||| ||||||| ||| Sbjct 669282 TGGAGAACATCCATTCTGAGACCTACTCGCTTCTCATTGATACCTACATCAAGGA 669228 >seq3 Length=917765 Score = 102 bits (112), Expect = 6e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 9147 TTGGGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCAT 9206 |||||||| | ||||| || |||||||| ||||| || || |||||| ||| ||| Sbjct 193986 TTGGGCCCTGTCTACGGCTTTCAGTGGCGCCATTTTGGCGCCGAGTACATAGATGCGCAT 194045 Query 9207 ACGGACTATACGGGCCAAGGTGTGGATCAGTTGGCGCAATGTATGCATCAGATCCAATAT 9266 | |||||||| || ||||| ||||||||||||||| || || | || | | || Sbjct 194046 GCAGACTATACAGGTCAAGGAGTGGATCAGTTGGCGGAAGTGATCGACAAGCTTAAGAAT 194105 Query 9267 GAGCCGAGTAGTCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGATG 9326 |||| ||| || || || ||| ||||||||||| ||| ||| | |||||| Sbjct 194106 AAGCCATACGATCGGCGTATCATCTTGAGCGCCTGGAATCCAGCCGACTTGAAGAAGATG 194165 Query 9327 GTATTGCCGCCATGCCATATG 9347 | ||||||| ||||| ||| Sbjct 194166 GCGCTGCCGCCTTGCCACATG 194186 >seq82 Length=10320 Score = 98.7 bits (108), Expect = 8e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || |||||||| ||||| | ||| || || || || || ||||| ||||| ||||| Sbjct 350 GAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACGATTTCCGTGCAG 291 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 ||||| || || || || || | ||| | || || |||||||| ||||| |||||| Sbjct 290 AGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 231 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTC 66162 ||||| | |||| | || | |||||||| Sbjct 230 TTGTAAAGCATGAAGGGGTTTCCGGTCTC 202 Score = 84.2 bits (92), Expect = 2e-11 Identities = 274/414 (66%), Gaps = 19/414 (5%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||||||||| || || || | | | || ||| |||| | || ||||||||||| || Sbjct 1269 ATCGACCGTAAATTGAATAGGCTGACTGGCTGCCATGGTGCGTAGGTAGTACATGCCCGT 1210 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 ||| || ||| ||| || ||| ||||| | | | || |||| | | || | Sbjct 1209 CTTAAGACCAAGCTTCCACCCAGCGAAGTGCAT-GCTCGTGATCTTGCCCATGGTGGGTT 1151 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGCC 65254 | || || || || | || ||| |||||| ||| |||| |||||||| || ||| Sbjct 1150 CTTTCATGTGAATGTTGAGAGATTGAGACTGATCAATG-AACGCGCCACGATCAGCGGCC 1092 Query 65255 ATGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-AC 65310 || | ||||| | || | || || |||||||| |||||||| || || | | | Sbjct 1091 ATCTGAACAATGGTGCGCTGA---GAGATTTCCCAGACAGTCTTGTAGAG-CGCCTTGAG 1036 Query 65311 CTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACG 65370 || || || | ||||| |||| |||||||| | ||||| || || || Sbjct 1035 GTCGGCAGGGATATTGGGAATGTTTTGGATTGAACCACCATCGGCAATGATACGGTTCTT 976 Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATGTT---GAACCAAGTGACGATTGAT 65427 ||| |||||||| | ||||| || | ||||| | ||| | || | |||| Sbjct 975 CATGTTATCTGACCATAGACCCATGTCAACAAGATCCTTCAGAAGCCAGGGG---TTGAC 919 Query 65428 GACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTG-ATGG 65480 |||||||||||| |||| || ||||| || ||||||||||| ||| |||| Sbjct 918 GACTTGGAACTCTCCGGCAAGGACACGGCGAGAGTAGATGTTGGATGTGTATGG 865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567181134160