Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq158 250 4e-64 seq78 212 9e-53 seq37 75.2 2e-11 >seq158 Length=8299 Score = 250 bits (276), Expect = 4e-64 Identities = 195/229 (85%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | |||||| ||||||||| || ||||||| ||| | Sbjct 3880 GTACAAAGGGCAGGGACGTAATCGGCACGAGCT-GATGACTCGTGCCTACTAGGCATT-C 3937 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 3938 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 3997 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||||||| ||||| || ||||||||||||||||||| Sbjct 3998 ACCCAGACCTCTCGGCCAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 4057 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 4058 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCACGTACTTCC 4106 >seq78 Length=586 Score = 212 bits (234), Expect = 9e-53 Identities = 179/216 (83%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| |||||||||||||||||| |||||||| ||||||| ||||| ||| ||||||||| Sbjct 486 GTATAAAGGGCAGGGACGTAGTTAACGCGAG-TTGATGATTCGCGTTTATTAGGAATTTT 428 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||| || ||||| |||||||||| || | |||||||||| |||||||| Sbjct 427 -TCGTTGAAGATTAATAATTGTAATGATCTATTTTTATTATGATGAAATTTTAAAGATTA 369 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||| ||||||| |||||| | | |||||||||| ||||||||||||||||||||| Sbjct 368 TCCGGGTCTGTCGGTTAAGGTGTGA-ATTCGTTGAATATATCAGTGTAGCGCGCGTGCGG 310 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216 ||||| || |||||| || ||||| |||||||| Sbjct 309 TTCAGAATATTTAAGGGTATTACAGATTTGTTATTG 274 >seq37 Length=980 Score = 75.2 bits (82), Expect = 2e-11 Identities = 75/95 (79%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 16 ACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAA 75 || || ||||| | | || || |||| | ||||||| |||| |||| || || ||||| Sbjct 809 ACATAATCAACACAAACTA-ATAACTCACACTTACTAAAAATT-CCTCATTAAAAACCAA 752 Query 76 CAATTGCAATGATCTATCCCCATCACGATGAAATT 110 ||||| |||| ||||||||||||||| || ||||| Sbjct 751 CAATTACAATAATCTATCCCCATCACAATAAAATT 717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998455580