Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12-
09] 212 sequences; 33,721,883 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq158 419 4e-115
seq78 149 1e-33
seq170 96.9 7e-18
>seq158
Length=8299
Score = 419 bits (464), Expect = 4e-115
Identities = 267/290 (92%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 39 TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGC 98
||||||||| || |||| || ||||| ||| |||||||||| ||||||||||||||||||
Sbjct 4170 TAAATAGCCCGGTCCGCGTTTGCGGGCCGCTGGCTTCTTAGGGGGACTATCGGCTCAAGC 4111
Query 99 CGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 158
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4110 CGATGGAAGTACGTGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 4051
Query 159 GCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG 218
||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||||||
Sbjct 4050 GCGCTACACTGACAGGGCCAGCGAGTACATCACCTTGGCCGAGAGGTCTGGGTAATCTTG 3991
Query 219 TTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 278
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3990 TTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 3931
Query 279 TAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| || || ||||||||| || | ||||||||||||||||||||||
Sbjct 3930 TAGTAGGCACGAGTCATCAGCTCGTGCCGATTACGTCCCTGCCCTTTGTA 3881
>seq78
Length=586
Score = 149 bits (164), Expect = 1e-33
Identities = 163/214 (76%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174
|||||||| ||||| || |||||| || ||||| |||||||||||||||||||| | |
Sbjct 274 CAATAACAAATCTGTAATACCCTTAAATATTCTGAACCGCACGCGCGCTACACTGATATA 333
Query 175 GCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGC 234
|||||| |||| |||||| ||| || | || ||||||| | ||| | || |
Sbjct 334 TTCAACGAATTCA-CACCTTAACCGACAGACCCGGATAATCTT-TAAAATTTCATCATAA 391
Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294
| ||||| |||| |||||||| |||||||||| ||| |||| ||| |||| |||
Sbjct 392 TAAAAATAGATCATTACAATTATTAATCTTCAACGAAAAATTCCTAATAAACGCGAATCA 451
Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| | |||||| | |||||||||||||||| ||
Sbjct 452 TCAACTCGCGTTAACTACGTCCCTGCCCTTTATA 485
>seq170
Length=1587042
Score = 96.9 bits (106), Expect = 7e-18
Identities = 147/207 (71%), Gaps = 17/207 (8%)
Strand=Plus/Plus
Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185
||||||| ||||| |||||| || || ||||||| | ||| || |||||
Sbjct 1486303 CTGTGATCCCCTTGAATGTTC-------CAA-CGTGCTACACGGGCAGGACCTGCGAGTG 1486354
Query 186 C----ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241
| || || || ||||| |||| || |||| ||||| ||| ||||||| ||
Sbjct 1486355 CGTACATTACATTAGCCGGGAGGTTTGAGTAACTTTGTTC----CTGCCGTGCTGAATAT 1486410
Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301
|| ||||| |||| |||||||||||||||||||||||| | || | ||||||||| |
Sbjct 1486411 AGGGCATTAAAATTGTTGCTCTTCAACGAGGAATGCCTA-TTGGCATGAGTCATCAGCTC 1486469
Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||| | || ||||||| |||||
Sbjct 1486470 GTTCCGATCAAGTTCCTGCCCATTGTA 1486496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947197991936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |