Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq158 836 0.0 seq73 192 2e-46 seq77 152 2e-34 >seq158 Length=8299 Score = 836 bits (926), Expect = 0.0 Identities = 489/505 (97%), Gaps = 1/505 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4995 GTTCTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 5054 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5055 CCCCGTATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 5114 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 5115 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 5174 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5175 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 5234 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 5235 CAAGGCCATGCGATTCGTGAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 5294 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 5295 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTGCGCATGTATTAGCTCTAG 5354 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 5355 AATTACCACAGGTATCCATGTAGTAGGGTACTATCAAATAAACGATAACTGATTTAATGA 5414 Query 421 GCCATTCGCAGTTTCACTGT-ATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 ||||||||||||||||| || | ||| ||||||||||||||||||||||||||||||||| Sbjct 5415 GCCATTCGCAGTTTCACAGTAAAAGAGTGCTTATACTTAGACATGCATGGCTTAATCTTT 5474 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 5475 GAGACAAGCATATGACTACTGGCAG 5499 >seq73 Length=633 Score = 192 bits (212), Expect = 2e-46 Identities = 210/278 (76%), Gaps = 1/278 (0%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | ||| | ||| |||| | |||||||| |||||||||| Sbjct 324 TACTCATTCCAATTACCAAACTCGAAAAAACCCGGTATTATTATTTATTATCACTACCTC 383 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 ||| | || | ||| |||||| | | ||| || |||||||| || | || || ||| Sbjct 384 CCCATATCAGAATTAAATAATTTACACACCTACTACCTTCCTTAAATATAATAACCATTT 443 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 |||| ||||||||||| |||||||||||||||| |||| ||||||| ||||| || Sbjct 444 CTCAAACTCCCTCTCCGAAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATAATAA 503 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 |||||||||||||||| ||| || ||| || |||||| ||| | |||| || | | Sbjct 504 ACCACTATCCTACCATCAAAAATTAATAAAACAAAAATTTAAATAATACATCACCAACAC 563 Query 242 A-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCA 278 | | |||| |||| | | | |||| || ||||| || Sbjct 564 AGAAACCATACGATCCATCGAATTATCATAAATCATCA 601 >seq77 Length=590 Score = 152 bits (168), Expect = 2e-34 Identities = 156/200 (78%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 302 TTTTATCTAATAAATACACCCCTTCCG-AAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||| ||||||| || || ||| | || ||||| ||||| Sbjct 500 TTTTATCTAATAAATACATCCCTTCCATAAATCAAAATTTATTACACATATTAACTCTAA 441 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||| || ||||||| || ||| ||| |||||| |||| |||||| ||||||| | Sbjct 440 AATTACTACAATTATCCAAATAATAAT-TACCATCAAACAAACTATAACTAATTTAATAA 382 Query 421 GCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||| || | ||| | | ||||||| |||| ||| |||||||||| Sbjct 381 ACCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATACATAACTTAATCTTT 322 Query 480 GAGACAAGCATATGACTACT 499 | |||| ||||| |||||| Sbjct 321 AAAACAAACATATAACTACT 302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510396797952