Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04-
29] 116 sequences; 34,715,840 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq42 260 3e-67
seq34 210 4e-52
>seq42
Length=11487
Score = 260 bits (288), Expect = 3e-67
Identities = 248/312 (79%), Gaps = 5/312 (2%)
Strand=Plus/Minus
Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATT-TCTAAC 88
|||| ||| || |||| | |||||||||||||||| |||| || |||| ||||||
Sbjct 10835 ACGCTAGTCTTACTGGAGGCAATGTTGGGATACTACCCTTGTTTGAT-GGATCCTCTAAC 10777
Query 89 CGGACGACGTATAACCGTTGACG-GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTC 147
|| | | |||| | |||||||||||| ||||||||||||||||||||||
Sbjct 10776 TCACAGAGCTG--AGCGTTCTGGAGGACAGTGTCAGGTGGGCAGTTTGACTGGGGCGGTC 10719
Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCG 207
|||||| ||| ||||||||||||||||||| | ||||||| ||| |||||| ||| ||
Sbjct 10718 GCCTCCTAAAATGTAACGGAGGCGCCCAAAGGTTCCCTCAGAATGGTTGGAAATCATTCG 10659
Query 208 CACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAA 267
|| |||| ||||| | ||||| | |||||||||| | || || |||||||||||||
Sbjct 10658 CAGAGTGTAAAGGTATAAGGGAGCTTGACTGCGAGAGGTACACCTCGAGCAGGGACGAAA 10599
Query 268 GTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCT 327
|||||||||| ||||| || ||| ||| |||||| |||| || ||| |||||||||||||
Sbjct 10598 GTCGGGCTTAGTGATCTGGTGGTACTGCATGGAAAGGCCATCACTCAACGGATAAAAGCT 10539
Query 328 ACCCTGGGGATA 339
||||||||||||
Sbjct 10538 ACCCTGGGGATA 10527
>seq34
Length=22252
Score = 210 bits (232), Expect = 4e-52
Identities = 184/229 (80%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
||||||||||| | ||| ||||| ||||||||||| |||||| |||| |||||||||||
Sbjct 2693 GGGACAGTGTCTGGTGGGTAGTTTAACTGGGGCGGTTGCCTCCTAAAGGGTAACGGAGGC 2752
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230
|||||||| | |||||||| ||| ||| || || | | |||| || ||| ||||| |
Sbjct 2753 GCCCAAAGGTTCCCTCAGCCTGGTTGGTAATCAGGTGTTGAGTGTAAGTGCACAAGGGAG 2812
Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290
||||||| || ||| | ||| ||||||||||||||||||| || ||||||||||||
Sbjct 2813 CTTGACTGTGAGACCGACGGGTCGAGCAGGGACGAAAGTCGGGACTAGTGATCCGGCGGT 2872
Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| ||||| |||||||||| ||||||||||| ||||| |||||||
Sbjct 2873 GGCTTGTGGAAGCGCCGTCGCTCAACGGATAAAAGGTACCCCGGGGATA 2921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982398860416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |