Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq34 197 3e-48 seq42 170 4e-40 >seq34 Length=22252 Score = 197 bits (218), Expect = 3e-48 Identities = 170/208 (82%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| || || | | | |||||||| | | ||| ||||||||| |||||| Sbjct 21580 TTTACAACCCGAAGGCCGTCATCC-CTCACGCGGCGTCG-CTGCATCAGGCTTCCGCCCA 21637 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 21638 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 21697 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | | || |||||||| || | ||| ||||||||||||| ||||| ||| ||| Sbjct 21698 GTGGCCGGTCGCCCTCTCAGGCCGGCTACCCGTCGTCGCCTTGGTAGGCCATCACCCCAC 21757 Query 182 CAACTAGCTAATCCGACCTAGGCTCATC 209 |||| |||| || | | |||||||| Sbjct 21758 CAACAAGCTGATAGGCCGCGGGCTCATC 21785 >seq42 Length=11487 Score = 170 bits (188), Expect = 4e-40 Identities = 155/193 (80%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||| | ||||| ||||||| ||| |||||||| ||| || ||||| ||| || || Sbjct 3096 CTTTACGAGCCGAAACCCTTCTT-CACTCACGCGGCGTTG-CTCCATCAGACTTGCGTCC 3153 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| || |||||| ||||||||||||||||||||| ||| |||||||||||| ||| Sbjct 3154 ATTGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCAA 3213 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | ||||| |||||| | | || | ||| | |||| ||| |||| |||||| | Sbjct 3214 TGTGGCCGATCAGTCTCTCAACTCGGCTATGCATCATTGCCTCGGTAAGCCGTTACCTTA 3273 Query 181 CCAACTAGCTAAT 193 ||||||||||||| Sbjct 3274 CCAACTAGCTAAT 3286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071998756480